Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17g06f
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457362-1|CAG33643.1|  125|Homo sapiens hage colony-stimulating...   143   7e-34
BC005024-1|AAH05024.1|  125|Homo sapiens mitochondria-associated...   143   7e-34
AK026514-1|BAB15494.1|  125|Homo sapiens protein ( Homo sapiens ...   143   7e-34
AF349455-1|AAL57767.1|  125|Homo sapiens mitochondria associated...   143   7e-34
AF151894-1|AAD34131.1|  125|Homo sapiens CGI-136 protein protein.     140   4e-33
BC001593-1|AAH01593.3|  393|Homo sapiens TP53I13 protein protein.      32   2.4  
AK075341-1|BAC11555.1|  393|Homo sapiens protein ( Homo sapiens ...    32   2.4  
AB110214-1|BAD08208.1|  393|Homo sapiens damage stimulated cytop...    32   2.4  
AB110209-1|BAD08203.1|  393|Homo sapiens damage stimulated cytop...    32   2.4  

>CR457362-1|CAG33643.1|  125|Homo sapiens hage colony-stimulating
           factor signal   protein.
          Length = 125

 Score =  143 bits (346), Expect = 7e-34
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 274
           MAKY+AQIIV+G QVVGRAFARAL+QE AAS+                     +GL+L+E
Sbjct: 1   MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58

Query: 275 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 451
           A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q   + E
Sbjct: 59  AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118

Query: 452 QGPSKDT 472
           +G    T
Sbjct: 119 KGQMPHT 125


>BC005024-1|AAH05024.1|  125|Homo sapiens mitochondria-associated
           protein involved in granulocyte-macrophage colony-stimu
           protein.
          Length = 125

 Score =  143 bits (346), Expect = 7e-34
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 274
           MAKY+AQIIV+G QVVGRAFARAL+QE AAS+                     +GL+L+E
Sbjct: 1   MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58

Query: 275 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 451
           A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q   + E
Sbjct: 59  AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118

Query: 452 QGPSKDT 472
           +G    T
Sbjct: 119 KGQMPHT 125


>AK026514-1|BAB15494.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22861 fis, clone KAT01850. ).
          Length = 125

 Score =  143 bits (346), Expect = 7e-34
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 274
           MAKY+AQIIV+G QVVGRAFARAL+QE AAS+                     +GL+L+E
Sbjct: 1   MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58

Query: 275 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 451
           A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q   + E
Sbjct: 59  AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118

Query: 452 QGPSKDT 472
           +G    T
Sbjct: 119 KGQMPHT 125


>AF349455-1|AAL57767.1|  125|Homo sapiens mitochondria associated
           granulocyte macrophage CSF signaling molecule Magmas
           protein.
          Length = 125

 Score =  143 bits (346), Expect = 7e-34
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 274
           MAKY+AQIIV+G QVVGRAFARAL+QE AAS+                     +GL+L+E
Sbjct: 1   MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58

Query: 275 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK-QTSPNSE 451
           A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK Q   + E
Sbjct: 59  AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDRE 118

Query: 452 QGPSKDT 472
           +G    T
Sbjct: 119 KGQMPHT 125


>AF151894-1|AAD34131.1|  125|Homo sapiens CGI-136 protein protein.
          Length = 125

 Score =  140 bits (340), Expect = 4e-33
 Identities = 70/112 (62%), Positives = 82/112 (73%)
 Frame = +2

Query: 95  MAKYIAQIIVLGAQVVGRAFARALKQEIAASQEXXXXXXXXXXXXXXXXXXXSTGLTLEE 274
           MAKY+AQIIV+G QVVGRAFARAL+QE AAS+                     +GL+L+E
Sbjct: 1   MAKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNL--SGLSLQE 58

Query: 275 AMQILNIEKVDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVRAKERLDAELK 430
           A QILN+ K+ PE++ KNYEHLF VNDKS GGSFYLQSK+VRAKERLD ELK
Sbjct: 59  AQQILNVSKLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELK 110


>BC001593-1|AAH01593.3|  393|Homo sapiens TP53I13 protein protein.
          Length = 393

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 282 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 166
           C+ SS+ +P    AA  RA  GP P    A+W A    F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319


>AK075341-1|BAC11555.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0020 fis, clone NT2RP1000255. ).
          Length = 393

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 282 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 166
           C+ SS+ +P    AA  RA  GP P    A+W A    F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319


>AB110214-1|BAD08208.1|  393|Homo sapiens damage stimulated
           cytoplasmic protein1 protein.
          Length = 393

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 282 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 166
           C+ SS+ +P    AA  RA  GP P    A+W A    F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319


>AB110209-1|BAD08203.1|  393|Homo sapiens damage stimulated
           cytoplasmic protein1 protein.
          Length = 393

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 282 CIASSKVNPVEALAAALRAPSGPPPALFAASWDAAISCF 166
           C+ SS+ +P    AA  RA  GP P    A+W A    F
Sbjct: 281 CVCSSQASPAPRAAAPPRAARGPTPRTEEAAWAAMALTF 319


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,319,619
Number of Sequences: 237096
Number of extensions: 1783254
Number of successful extensions: 8580
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8575
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)