Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17f23f
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p pro...    29   5.2  
AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer, be...    29   5.2  
AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer, be...    29   5.2  
AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA...    29   5.2  

>BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 297 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 199
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 297 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 199
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 297 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 199
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


>AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 297 DDVA*SSAFDVLGESGKCMEVFLWRDDNFSSIN 199
           +D    SAF+VLGE  +C++  LW  D F   N
Sbjct: 508 EDDGVESAFNVLGEVSECVKTGLWVGDCFIYTN 540


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,331,077
Number of Sequences: 53049
Number of extensions: 628381
Number of successful extensions: 1840
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)