Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17f16f
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 161 5e-40
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 161 5e-40
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 107 7e-24
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 101 6e-22
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 101 6e-22
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 101 6e-22
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 47 1e-05
AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical ... 39 0.003
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 33 0.30
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 32 0.53
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 31 0.70
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 31 0.70
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 31 0.70
Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 31 1.2
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 30 1.6
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 30 1.6
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 30 2.1
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 2.1
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 2.1
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 3.7
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical ... 29 3.7
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 29 4.9
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 4.9
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 4.9
L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 28 6.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 8.6
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 161 bits (391), Expect = 5e-40
Identities = 86/160 (53%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Frame = +2
Query: 218 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 397
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 398 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 571
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 572 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 691
D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLL 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 706 NVCDQAVWALGNIIGDGPVLRDF 774
NVC+Q+VWALGNIIGDGP RD+
Sbjct: 165 NVCEQSVWALGNIIGDGPHFRDY 187
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 161 bits (391), Expect = 5e-40
Identities = 86/160 (53%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Frame = +2
Query: 218 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 397
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 398 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 571
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 572 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 691
D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLL 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 706 NVCDQAVWALGNIIGDGPVLRDF 774
NVC+Q+VWALGNIIGDGP RD+
Sbjct: 165 NVCEQSVWALGNIIGDGPHFRDY 187
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 107 bits (258), Expect = 7e-24
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +2
Query: 485 LLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAG 664
+LS D+NPPID+LI +GILP+LVQCLS D P LQFE AWALTNIASGTS QT VV+AG
Sbjct: 1 MLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAG 59
Query: 665 AVPVFLQLL 691
AVP+FLQLL
Sbjct: 60 AVPLFLQLL 68
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 706 NVCDQAVWALGNIIGDGPVLRDF 774
NVC+Q+VWALGNIIGDGP RD+
Sbjct: 74 NVCEQSVWALGNIIGDGPHFRDY 96
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 101 bits (242), Expect = 6e-22
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Frame = +2
Query: 227 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 382
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 383 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 556
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 557 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHETYVIRQ 724
LS +N +Q+E AWALTNI SG++ QT V AG + L S H++ I +
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHL--SVHQSAQISE 192
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 512 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIA-SGTSAQTNKVVHAGAVPVFLQL 688
I ++ A +LP+L+ L D+ QFE +WAL+N+A GT+ Q ++ VP Q
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQA 438
Query: 689 LMSPHETYVIRQYGPSVT*SATVQS 763
L+ + + T TVQ+
Sbjct: 439 LLQTNTDMLNNTLETLYTLMLTVQN 463
Score = 35.5 bits (78), Expect = 0.043
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 353 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 526
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 527 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 697
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKS 398
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 709 VCDQAVWALGNIIGDGPVLRDFV 777
+ +QA+WA+ NI GD LRD+V
Sbjct: 190 ISEQALWAVANIAGDSSQLRDYV 212
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +2
Query: 272 RRRRNEVTVELRKNKREETLQKR-RNVPISYS-TDEEEIDKNLATTDLDELVMNAANAEN 445
R +E+ L N E+ + + ++ S S T ID+ + L LV A + EN
Sbjct: 87 RLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ-ALSVEN 145
Query: 446 PEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIAS 625
Q A ++S I + A +P++ LS + + + WA+ NIA
Sbjct: 146 ERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIH--LSVHQSAQISEQALWAVANIAG 203
Query: 626 GTSAQTNKVVHAGAVPVFLQLL 691
+S + V+ V + L+
Sbjct: 204 DSSQLRDYVIKCHGVEALMHLM 225
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 101 bits (242), Expect = 6e-22
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Frame = +2
Query: 227 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 382
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 383 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 556
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 557 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHETYVIRQ 724
LS +N +Q+E AWALTNI SG++ QT V AG + L S H++ I +
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHL--SVHQSAQISE 192
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 512 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIA-SGTSAQTNKVVHAGAVPVFLQL 688
I ++ A +LP+L+ L D+ QFE +WAL+N+A GT+ Q ++ VP Q
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQA 438
Query: 689 LMSPHETYVIRQYGPSVT*SATVQS 763
L+ + + T TVQ+
Sbjct: 439 LLQTNTDMLNNTLETLYTLMLTVQN 463
Score = 35.5 bits (78), Expect = 0.043
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 353 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 526
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 527 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 697
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKS 398
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 709 VCDQAVWALGNIIGDGPVLRDFV 777
+ +QA+WA+ NI GD LRD+V
Sbjct: 190 ISEQALWAVANIAGDSSQLRDYV 212
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +2
Query: 272 RRRRNEVTVELRKNKREETLQKR-RNVPISYS-TDEEEIDKNLATTDLDELVMNAANAEN 445
R +E+ L N E+ + + ++ S S T ID+ + L LV A + EN
Sbjct: 87 RLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ-ALSVEN 145
Query: 446 PEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIAS 625
Q A ++S I + A +P++ LS + + + WA+ NIA
Sbjct: 146 ERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIH--LSVHQSAQISEQALWAVANIAG 203
Query: 626 GTSAQTNKVVHAGAVPVFLQLL 691
+S + V+ V + L+
Sbjct: 204 DSSQLRDYVIKCHGVEALMHLM 225
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 101 bits (242), Expect = 6e-22
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Frame = +2
Query: 227 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 382
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 383 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 556
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 557 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHETYVIRQ 724
LS +N +Q+E AWALTNI SG++ QT V AG + L S H++ I +
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHL--SVHQSAQISE 192
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 512 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIA-SGTSAQTNKVVHAGAVPVFLQL 688
I ++ A +LP+L+ L D+ QFE +WAL+N+A GT+ Q ++ VP Q
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQA 438
Query: 689 LMSPHETYVIRQYGPSVT*SATVQS 763
L+ + + T TVQ+
Sbjct: 439 LLQTNTDMLNNTLETLYTLMLTVQN 463
Score = 35.5 bits (78), Expect = 0.043
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 353 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 526
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 527 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 697
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKS 398
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 709 VCDQAVWALGNIIGDGPVLRDFV 777
+ +QA+WA+ NI GD LRD+V
Sbjct: 190 ISEQALWAVANIAGDSSQLRDYV 212
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +2
Query: 272 RRRRNEVTVELRKNKREETLQKR-RNVPISYS-TDEEEIDKNLATTDLDELVMNAANAEN 445
R +E+ L N E+ + + ++ S S T ID+ + L LV A + EN
Sbjct: 87 RLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ-ALSVEN 145
Query: 446 PEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIAS 625
Q A ++S I + A +P++ LS + + + WA+ NIA
Sbjct: 146 ERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIH--LSVHQSAQISEQALWAVANIAG 203
Query: 626 GTSAQTNKVVHAGAVPVFLQLL 691
+S + V+ V + L+
Sbjct: 204 DSSQLRDYVIKCHGVEALMHLM 225
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +2
Query: 221 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 394
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +2
Query: 221 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 394
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical
protein F23F1.5 protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 227 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 406
R +KN K ++ +RR E T+E +KN R +T K RN+ T +E+ ++ + TT
Sbjct: 28 RYSQYKNLTKAAEQQAKRREE-TLERQKNGRFDTFMKLRNLAFDDVTSDEDDEQKIETTT 86
Query: 407 LDE 415
++
Sbjct: 87 AEK 89
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 182 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY 361
+ A ++ D+ + +M+V + A KD E R ++++ E R+ K EE +K +
Sbjct: 1033 QDADIERAEADEQRRKMNV-ERAKKD--EERAKKDKRDAEERRKKDEERAKKDKEDAKKA 1089
Query: 362 STDEEEIDK 388
D+E+IDK
Sbjct: 1090 KEDQEKIDK 1098
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/96 (21%), Positives = 48/96 (50%)
Frame = +2
Query: 197 DKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEE 376
DK + K + ++ D EM RRR + + K +++ +++R V S S DE+
Sbjct: 230 DKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVNDSSSDDED 289
Query: 377 EIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRK 484
E +K + + + +++E+ E + ++ ++ +K
Sbjct: 290 EEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKK 325
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 31.5 bits (68), Expect = 0.70
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 407 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 586
L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P +
Sbjct: 523 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 579
Query: 587 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHETYV 715
Q L N++ G NK V+ A V + ++L + H+ V
Sbjct: 580 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASV 624
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 31.5 bits (68), Expect = 0.70
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 407 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 586
L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P +
Sbjct: 693 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 749
Query: 587 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHETYV 715
Q L N++ G NK V+ A V + ++L + H+ V
Sbjct: 750 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASV 794
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 308 KNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 439
+ +R + +KR++ S T +EE ++LATTD + V+N A++
Sbjct: 260 ERERARSRRKRKDEASSAVTSDEEDQEDLATTDSENPVINGASS 303
>Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical
protein R06A4.4b protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 688 LDVTS*NVCDQAVWALGNI-IGDGPVLRDFV 777
LD + +VC+ A+WALG + + GP ++ F+
Sbjct: 245 LDPSKISVCNNAIWALGELALKMGPAMKQFI 275
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 688 LDVTS*NVCDQAVWALGNI-IGDGPVLRDFV 777
LD + +VC+ A+WALG + + GP ++ F+
Sbjct: 709 LDPSKISVCNNAIWALGELALKMGPAMKQFI 739
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 314 KREETLQKRRNVPIS--YSTDEEEIDKNLATTDLDE 415
K+E+ KR NVP++ YS + KN +TT L E
Sbjct: 98 KKEDDKSKRENVPLTVVYSNPSISVSKNFSTTPLAE 133
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +2
Query: 179 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKN-KREETLQKRRNVPI 355
+E+ ++ + K R K+ +EMR+R ++ E+R N +R + ++K
Sbjct: 197 MESEVDQQLELTEMKARQEERDRLTKEKEEMRQRMSDEMSEMRNNIERLQKMEKALEREN 256
Query: 356 SYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA-A 532
++E+ L + + + AEN +LA ++ + C+ + DEL A
Sbjct: 257 ERLNHQKELSDKLKVVNEENNDLRQNLAEN-HLELAMIKSELAQVRCEFDQKQDELSARR 315
Query: 533 GIL 541
GIL
Sbjct: 316 GIL 318
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 253 ACILEHMHAVFRLISRHFICARCLDTV 173
A ILE+M A+FR +S F+ +CLD +
Sbjct: 447 AFILENMSALFRRLSDEFVEDKCLDVI 473
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +2
Query: 200 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR-----NVPISYS 364
++A D+A+ + KD DE+ RR ++ + ++ RE+ R N S +
Sbjct: 200 RVAEDRARIEKKEEEMEHKDWDELEARRRKIFEDEKEKNREDDASIRESMVSANTEFSEA 259
Query: 365 TDEEEIDKNLATTDLDELVMNAANAENPE-AQLAAVQQCRKLLSCD 499
T EE + N D ++ V E + A+L + + + S D
Sbjct: 260 TKEEMNEINNILQDAEQRVAETKKQEEHDAAELRTLMKSTRQKSLD 305
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 185 TASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISY 361
TA +DK Q + H KNA D+ E +RR E+ E ++ + R + K N +
Sbjct: 807 TAISDKENRSQIEME-HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQK 865
Query: 362 STDEEEI 382
S + +++
Sbjct: 866 SAENDKM 872
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 185 TASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISY 361
TA +DK Q + H KNA D+ E +RR E+ E ++ + R + K N +
Sbjct: 819 TAISDKENRSQIEME-HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQK 877
Query: 362 STDEEEI 382
S + +++
Sbjct: 878 SAENDKM 884
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 472
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 473 QCRKLLS-CDKNPP 511
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 472
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 473 QCRKLLS-CDKNPP 511
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical
protein C52A10.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 526 YELINRRVFITREQFSALLHS 464
YEL+ R +F+T EQ S +L+S
Sbjct: 199 YELVGREIFLTSEQLSKVLNS 219
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 155 LCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQ 334
L V Y ++ S DK+ T + K R + ++ +R N V E K K+E+ +
Sbjct: 1205 LQVRVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKEKKEE 1264
Query: 335 K 337
K
Sbjct: 1265 K 1265
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/94 (20%), Positives = 38/94 (40%)
Frame = +2
Query: 179 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 358
VE ++ D+ N+ K RRR + T +R ++ +V
Sbjct: 267 VEANRKEQNYVDKPNNKFKKLTKEEKKAQWEERRRQKDTERAEDEERRREAEEDEDVSDE 326
Query: 359 YSTDEEEIDKNLATTDLDELVMNAANAENPEAQL 460
S ++EE + + T + + LV+ ++ P +L
Sbjct: 327 ESDEDEEEFEIIGTPEREALVLREHSSTPPPEEL 360
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 242 KNAGKDVDEMRRRRNEVTVE--LRKNKREETLQKRRNV--PISYSTDEEEIDKNLATTDL 409
+ +D D RRRR E + E R+++R E +RR V P E+E +N ++
Sbjct: 69 RETDRDDDRRRRRRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEE 128
Query: 410 DE 415
DE
Sbjct: 129 DE 130
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 524 IAAGILPILVQCLSRADNPALQFETAWALTNIASGTSA 637
+ + L IL++ L R+ N L +T WA+ NIA+ S+
Sbjct: 80 VNSNCLDILIK-LVRSQNARLSSQTVWAIANIAADCSS 116
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -2
Query: 639 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 460
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 459 NCA--SGFSALAAFITSSS 409
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -2
Query: 639 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 460
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 459 NCA--SGFSALAAFITSSS 409
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome
assembly factor protein19 protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +2
Query: 242 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 421
+ A KD +M + + E K + + P+ D E + A L E
Sbjct: 56 QKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLD-PNDPEALAMMDALKQLMECS 114
Query: 422 MNAANAENPEAQLAAVQQCR 481
N ANA NPE +A + R
Sbjct: 115 SNVANASNPEEFMAGLDMLR 134
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 254 KDVDEMRR---RRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 385
+D D+ RR RR++V + R+ KREE ++ + S DE+EID
Sbjct: 585 RDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKD-AESKDEDEID 630
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,408,849
Number of Sequences: 27780
Number of extensions: 412239
Number of successful extensions: 1475
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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