Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17f09r
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open read... 100 8e-21
AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein. 100 8e-21
CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein. 90 1e-17
BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated endop... 90 1e-17
BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated endop... 90 1e-17
BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated endop... 90 1e-17
AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membr... 90 1e-17
AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein. 90 1e-17
BC029488-1|AAH29488.1| 294|Homo sapiens sperm acrosome associat... 31 7.5
AL136096-1|CAI19915.1| 294|Homo sapiens sperm acrosome associat... 31 7.5
AF203447-1|AAG31422.1| 294|Homo sapiens sperm acrosome membrane... 31 7.5
AY358817-1|AAQ89176.1| 600|Homo sapiens EMR3 protein. 30 9.9
AF239764-1|AAK15076.1| 652|Homo sapiens EGF-like module-contain... 30 9.9
>BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open reading
frame 21 protein.
Length = 65
Score = 100 bits (239), Expect = 8e-21
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 676
M KQR+R+ANE SKNIT RGNV KT + +E++YPV PWLLALF+FVVCGSA+FQIIQS
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60
Query: 675 IRL 667
IR+
Sbjct: 61 IRM 63
>AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein.
Length = 65
Score = 100 bits (239), Expect = 8e-21
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 676
M KQR+R+ANE SKNIT RGNV KT + +E++YPV PWLLALF+FVVCGSA+FQIIQS
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60
Query: 675 IRL 667
IR+
Sbjct: 61 IRM 63
>CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membrane
protein 4 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein.
Length = 66
Score = 89.8 bits (213), Expect = 1e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 855 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 679
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 678 SIRL 667
SIR+
Sbjct: 61 SIRM 64
>BC029488-1|AAH29488.1| 294|Homo sapiens sperm acrosome associated
1 protein.
Length = 294
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 796 EGECTQNY*GKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 671
E +C R P CG P S L SV L C+ +P+N+
Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146
>AL136096-1|CAI19915.1| 294|Homo sapiens sperm acrosome associated
1 protein.
Length = 294
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 796 EGECTQNY*GKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 671
E +C R P CG P S L SV L C+ +P+N+
Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146
>AF203447-1|AAG31422.1| 294|Homo sapiens sperm acrosome membrane
protein SAMP32 protein.
Length = 294
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 796 EGECTQNY*GKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 671
E +C R P CG P S L SV L C+ +P+N+
Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146
>AY358817-1|AAQ89176.1| 600|Homo sapiens EMR3 protein.
Length = 600
Score = 30.3 bits (65), Expect = 9.9
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 569 RCWCKLCLNFRWIVLLFYCVFDSSSPVVFVI*ASLIDWIIWNTAEPHTTKMKRARSQGAT 748
RCW L F W L C S++ V+F+ L+ WI+ +++ ++
Sbjct: 443 RCWLHLDQGFMWSFLGPVCAIFSANLVLFI----LVFWILKRKLSSLNSEVSTIQNTRML 498
Query: 749 GYWSSFSLVVLGTFPLIVMFLLAISLAIRILC-LGAILFWLXSIFVSLI 892
+ ++ L +LG + LL + A +++ L I+ L F+ L+
Sbjct: 499 AFKATAQLFILGC--TWCLGLLQVGPAAQVMAYLFTIINSLQGFFIFLV 545
>AF239764-1|AAK15076.1| 652|Homo sapiens EGF-like module-containing
mucin-like receptor EMR3 protein.
Length = 652
Score = 30.3 bits (65), Expect = 9.9
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 569 RCWCKLCLNFRWIVLLFYCVFDSSSPVVFVI*ASLIDWIIWNTAEPHTTKMKRARSQGAT 748
RCW L F W L C S++ V+F+ L+ WI+ +++ ++
Sbjct: 495 RCWLHLDQGFMWSFLGPVCAIFSANLVLFI----LVFWILKRKLSSLNSEVSTIQNTRML 550
Query: 749 GYWSSFSLVVLGTFPLIVMFLLAISLAIRILC-LGAILFWLXSIFVSLI 892
+ ++ L +LG + LL + A +++ L I+ L F+ L+
Sbjct: 551 AFKATAQLFILGC--TWCLGLLQVGPAAQVMAYLFTIINSLQGFFIFLV 597
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,786,481
Number of Sequences: 237096
Number of extensions: 2500544
Number of successful extensions: 4441
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4435
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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