Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17f08r
         (946 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p pro...    85   1e-16
AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA ...    85   1e-16
Y11820-1|CAA72505.1|  347|Drosophila melanogaster S-adenosylmeth...    31   2.3  
Y11216-1|CAA72102.1|  347|Drosophila melanogaster S-adenosylmeth...    31   2.3  
BT021946-1|AAX51651.1|  347|Drosophila melanogaster LD20439p pro...    31   2.3  
AE014134-1842|AAF52917.1|  347|Drosophila melanogaster CG5029-PA...    31   2.3  
AY113389-1|AAM29394.1|  343|Drosophila melanogaster RE06383p pro...    29   7.0  
AE014296-2569|AAF49585.2|  343|Drosophila melanogaster CG7554-PA...    29   7.0  

>AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p
           protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 1e-16
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -3

Query: 764 YSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 606
           Y +DY  IFNIILWF VVF  +L+AI YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320


>AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA
           protein.
          Length = 320

 Score = 85.0 bits (201), Expect = 1e-16
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -3

Query: 764 YSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 606
           Y +DY  IFNIILWF VVF  +L+AI YA+  MDPGRDSIIYRMT+TR+KKDN
Sbjct: 268 YGSDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320


>Y11820-1|CAA72505.1|  347|Drosophila melanogaster
           S-adenosylmethionine decarboxylase protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 186 ITPQTEYSACLSYYLHTETNYVLYNYSELLNRILN 290
           ITP+ ++S     Y+  ETN  L NY +L+N+++N
Sbjct: 252 ITPENQFS-----YVSFETNVALSNYRKLINQVIN 281


>Y11216-1|CAA72102.1|  347|Drosophila melanogaster
           S-adenosylmethionine decarboxylase protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 186 ITPQTEYSACLSYYLHTETNYVLYNYSELLNRILN 290
           ITP+ ++S     Y+  ETN  L NY +L+N+++N
Sbjct: 252 ITPENQFS-----YVSFETNVALSNYRKLINQVIN 281


>BT021946-1|AAX51651.1|  347|Drosophila melanogaster LD20439p
           protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 186 ITPQTEYSACLSYYLHTETNYVLYNYSELLNRILN 290
           ITP+ ++S     Y+  ETN  L NY +L+N+++N
Sbjct: 252 ITPENQFS-----YVSFETNVALSNYRKLINQVIN 281


>AE014134-1842|AAF52917.1|  347|Drosophila melanogaster CG5029-PA,
           isoform A protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 186 ITPQTEYSACLSYYLHTETNYVLYNYSELLNRILN 290
           ITP+ ++S     Y+  ETN  L NY +L+N+++N
Sbjct: 252 ITPENQFS-----YVSFETNVALSNYRKLINQVIN 281


>AY113389-1|AAM29394.1|  343|Drosophila melanogaster RE06383p
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 785 NSVDEDGYSADYAAIFNIILWFGVVFTFTLIAIVYAL 675
           +SVD+     +Y    N + W G+VFT  LI++V+ +
Sbjct: 103 SSVDQLQQQLEYDKFMNEV-WIGIVFTLILISMVFCI 138


>AE014296-2569|AAF49585.2|  343|Drosophila melanogaster CG7554-PA
           protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 785 NSVDEDGYSADYAAIFNIILWFGVVFTFTLIAIVYAL 675
           +SVD+     +Y    N + W G+VFT  LI++V+ +
Sbjct: 103 SSVDQLQQQLEYDKFMNEV-WIGIVFTLILISMVFCI 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,180,199
Number of Sequences: 53049
Number of extensions: 835199
Number of successful extensions: 2257
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)