Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17f05r
(877 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 27 0.23
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 26 0.40
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 2.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 2.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 2.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 24 2.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 2.1
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 24 2.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 6.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 8.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 8.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 8.5
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 27.1 bits (57), Expect = 0.23
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +1
Query: 715 NNRVDRRRSSATVTVY-YYD-----NIPIIVKARSSIVSSGKVVFGEC 840
N+ ++R SA V + YYD N+ V SSI SSG V GEC
Sbjct: 126 NDYINRLNYSAFVNLTAYYDGGANLNLNGTVNCTSSIASSGVVSAGEC 173
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 26.2 bits (55), Expect = 0.40
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 220 SVQHRSGDNRK*LPRIYS*NGYCQTCKAWVWNVPSKYRHEVPIPFVMP 77
S+ +R+ N Y+ N Y CK +N+ Y ++P+P +P
Sbjct: 84 SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI--NYIEQIPVPVPVP 129
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 172 YS*NGYCQTCKAWVWNVPSKYRHEVPIP 89
Y+ N Y CK +N+ Y ++PIP
Sbjct: 100 YNNNNYNNNCKKLYYNI--NYIEQIPIP 125
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 172 YS*NGYCQTCKAWVWNVPSKYRHEVPIP 89
Y+ N Y CK +N+ Y ++PIP
Sbjct: 100 YNNNNYNNNCKKLYYNI--NYIEQIPIP 125
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 172 YS*NGYCQTCKAWVWNVPSKYRHEVPIP 89
Y+ N Y CK +N+ Y ++PIP
Sbjct: 100 YNNNNYNNNCKKLYYNI--NYIEQIPIP 125
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 453 DWENNVLRLGTNDAQYVEVIH 391
DW N+ + G N + +E+IH
Sbjct: 232 DWLFNLTKYGKNQIKLLEIIH 252
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 702 LTSGDYNVIVVDWSSF 655
+ +GDY V+ +WSSF
Sbjct: 379 IQNGDYVVLETEWSSF 394
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 702 LTSGDYNVIVVDWSSF 655
+ +GDY V+ +WSSF
Sbjct: 85 IQNGDYVVLETEWSSF 100
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 255 AATITHGKHYGNQCSTEAEITANN 184
A+ + K+Y CSTE +T N
Sbjct: 441 ASVTPYNKNYTKFCSTEKRLTKQN 464
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 724 VDRRRSSATVTVYYYDNIPIIVKARSSIVSSG 819
VD+ R VT+ YD +P + S G
Sbjct: 70 VDQWRDKTFVTILRYDGVPSTLNVISGKTGKG 101
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 777 DIVVIIHGHSGTATTTINPIVK 712
+IVVI H SG +TTT + I K
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYK 30
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 88 FVMPTKLKTKFSVMTNKISFYINY 17
FV T L + VM + +SF+IN+
Sbjct: 244 FVFQTYLPSILIVMLSWVSFWINH 267
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 777 DIVVIIHGHSGTATTTINPIVK 712
+IVVI H SG +TTT + I K
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYK 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,394
Number of Sequences: 438
Number of extensions: 6455
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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