Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17f04r
(898 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB... 31 1.6
BT023238-1|AAY55654.1| 152|Drosophila melanogaster IP09961p pro... 31 2.8
BT023218-1|AAY55634.1| 152|Drosophila melanogaster IP09861p pro... 31 2.8
BT023210-1|AAY55626.1| 152|Drosophila melanogaster IP09761p pro... 31 2.8
BT023194-1|AAY55610.1| 152|Drosophila melanogaster IP09661p pro... 31 2.8
AE013599-3638|AAM68259.2| 249|Drosophila melanogaster CG30182-P... 31 2.8
U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specifi... 30 3.7
AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-P... 30 3.7
AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB... 30 4.9
AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA... 30 4.9
AE014296-2312|AAN11813.1| 231|Drosophila melanogaster CG32132-P... 29 6.5
AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-P... 29 6.5
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P... 29 8.6
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P... 29 8.6
>AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB,
isoform B protein.
Length = 1019
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 499 ALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEKDNGRKWSQPSHRKVTQG 648
ALVR HHSG R+Q+ A+ EKD+ + Q +++++G
Sbjct: 212 ALVRRTNHHSGREQQEIQPLMRDQRKAEQRHEKDHQLEREQQGIQQLSKG 261
>BT023238-1|AAY55654.1| 152|Drosophila melanogaster IP09961p
protein.
Length = 152
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 454 P*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEK 597
P +C++++ WP SN L R P H +++ R H R P K
Sbjct: 19 PQVLCQERVCWP-SNELHRNLPRHRNFYHGRNIFHPRSNNNLNEFPAK 65
>BT023218-1|AAY55634.1| 152|Drosophila melanogaster IP09861p
protein.
Length = 152
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 454 P*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEK 597
P +C++++ WP SN L R P H +++ R H R P K
Sbjct: 19 PQVLCQERVCWP-SNELHRNLPRHRNFYHGRNIFHPRSNNNLNEFPAK 65
>BT023210-1|AAY55626.1| 152|Drosophila melanogaster IP09761p
protein.
Length = 152
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 454 P*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEK 597
P +C++++ WP SN L R P H +++ R H R P K
Sbjct: 19 PQVLCQERVCWP-SNELHRNLPRHRNFYHGRNIFHPRSNNNLNEFPAK 65
>BT023194-1|AAY55610.1| 152|Drosophila melanogaster IP09661p
protein.
Length = 152
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 454 P*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEK 597
P +C++++ WP SN L R P H +++ R H R P K
Sbjct: 19 PQVLCQERVCWP-SNELHRNLPRHRNFYHGRNIFHPRSNNNLNEFPAK 65
>AE013599-3638|AAM68259.2| 249|Drosophila melanogaster CG30182-PA
protein.
Length = 249
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 454 P*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEK 597
P +C++++ WP SN L R P H +++ R H R P K
Sbjct: 19 PQVLCQERVCWP-SNELHRNLPRHRNFYHGRNIFHPRSNNNLNEFPAK 65
>U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specific
RNP-type RNA bindingprotein protein.
Length = 808
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 520 HHSGYHNLRCHTHRREQKMAKHHPEKDNGRKWSQPSHR 633
HHS +H L+ HT +Q+ HH + + P R
Sbjct: 103 HHSHHHQLQRHTALHQQQQQLHHHQPHHNHHHHHPYQR 140
>AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-PB,
isoform B protein.
Length = 810
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 520 HHSGYHNLRCHTHRREQKMAKHHPEKDNGRKWSQPSHR 633
HHS +H L+ HT +Q+ HH + + P R
Sbjct: 103 HHSHHHQLQRHTALNQQQQQLHHHQPHHNHHHHHPYQR 140
>AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB,
isoform B protein.
Length = 312
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 451 HP*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEKDNGRKW 615
H P+ + S S+A+ P H GYH+ H H++ Q+ + H + R+W
Sbjct: 236 HMSPISQGSGSGSSSSAICVPGAGH-GYHH---HHHQQHQEQQQQHHHHHHQRQW 286
>AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA,
isoform A protein.
Length = 355
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 451 HP*PVCRQKISWPQSNALVRPNPHHSGYHNLRCHTHRREQKMAKHHPEKDNGRKW 615
H P+ + S S+A+ P H GYH+ H H++ Q+ + H + R+W
Sbjct: 279 HMSPISQGSGSGSSSSAICVPGAGH-GYHH---HHHQQHQEQQQQHHHHHHQRQW 329
>AE014296-2312|AAN11813.1| 231|Drosophila melanogaster CG32132-PA
protein.
Length = 231
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 520 HHSGYHNLRCHTHRREQKMAKHHPEKDNGRKW-SQPSHRKVTQGGGH 657
HH +H+ H + Q +HHP+ + ++ SQ H++ + +
Sbjct: 176 HHHHHHHREHHEQHQHQHGHQHHPQHQHHHQYSSQQQHQRYSSSNSY 222
>AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-PA
protein.
Length = 706
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 511 PNPHHSGYHNLRCHTHRREQKMAKHHPEKDNGRKW--SQPSHRKVTQGGGH 657
P+PH + L+ H H++ + A H +G S PSH GH
Sbjct: 247 PHPHPTAAQQLQMHQHQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNHHGH 297
>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
isoform B protein.
Length = 2309
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Frame = +1
Query: 520 HHSGYHNLRCHTHRREQKMAKHHPEKD--------NGRKWSQPSHRKVTQG 648
HH+G+ N H +Q HH ++ +GR++ SHR G
Sbjct: 303 HHAGHQNHHQHQQHHQQHQQHHHQQQQHHRDYHHGHGRQYGHHSHRDYRDG 353
>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
isoform A protein.
Length = 2309
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Frame = +1
Query: 520 HHSGYHNLRCHTHRREQKMAKHHPEKD--------NGRKWSQPSHRKVTQG 648
HH+G+ N H +Q HH ++ +GR++ SHR G
Sbjct: 303 HHAGHQNHHQHQQHHQQHQQHHHQQQQHHRDYHHGHGRQYGHHSHRDYRDG 353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,867,953
Number of Sequences: 53049
Number of extensions: 785717
Number of successful extensions: 2138
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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