Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17f02f
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318...    32   1.7  
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318...    32   1.7  
BC012934-1|AAH12934.1|  311|Homo sapiens forkhead box R2 protein.      32   2.3  

>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 26/66 (39%), Positives = 29/66 (43%)
 Frame = +3

Query: 360 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 539
           SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVSP    PP A
Sbjct: 29  SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85

Query: 540 LIQGPS 557
               PS
Sbjct: 86  RRGSPS 91


>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 26/66 (39%), Positives = 29/66 (43%)
 Frame = +3

Query: 360 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 539
           SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVSP    PP A
Sbjct: 29  SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85

Query: 540 LIQGPS 557
               PS
Sbjct: 86  RRGSPS 91


>BC012934-1|AAH12934.1|  311|Homo sapiens forkhead box R2 protein.
          Length = 311

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +2

Query: 494 VDSARLSWSSPPSHCTHTGALLLGSHYANFIAITQCYSFRKKSF 625
           +++   SW  PP +C+H  AL L ++    +++ + Y+F ++ F
Sbjct: 183 INNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEIYNFTRQHF 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,491,489
Number of Sequences: 237096
Number of extensions: 2389608
Number of successful extensions: 6632
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)