Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17f01r
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-8|AAB53011.1|  425|Caenorhabditis elegans Hypothetical pr...   231   6e-61
Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF022971-1|AAG23975.1|  380|Caenorhabditis elegans Hypothetical ...    29   4.3  
AL117207-16|CAH60778.1|  402|Caenorhabditis elegans Hypothetical...    29   5.7  
Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z81589-5|CAB04722.1|  233|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z81589-4|CAB04721.1|  256|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    28   9.9  
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ...    28   9.9  
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei...    28   9.9  

>U97405-8|AAB53011.1|  425|Caenorhabditis elegans Hypothetical
           protein T09B4.9 protein.
          Length = 425

 Score =  231 bits (564), Expect = 6e-61
 Identities = 115/259 (44%), Positives = 167/259 (64%), Gaps = 3/259 (1%)
 Frame = -2

Query: 863 KTARSAAEGIADKGQRIGQTSAFRTISQATEVVKNEMSPRGLEGRVYIAPVALRKRIEV- 687
           K AR AAE +    +++G T  ++ +S + + VK+E+     + R+Y  P AL KR +  
Sbjct: 133 KQARKAAEHVEKVAEKVGDTEVYKHVSTSMKTVKDEIDNIA-DVRMYSRPEALTKRTDGF 191

Query: 686 -AEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRAS 510
             E ER    +   T V LHKDSK+Y  W+NF  +N Y +K+LDWKIKY+ESDN  VR  
Sbjct: 192 DLEKERVVEANDSATDVTLHKDSKWYSGWKNFSESNTYYHKLLDWKIKYDESDNMAVRMM 251

Query: 509 RLLTEKMGSLFGNMFEKTELSKTLTEICKIDPNFTAQKFLEDCANDIIPNILEAMVRGDL 330
           R +TEK+GS+F     + E+S+ LTEI KID NF  Q++L  C   IIPNILEA +R DL
Sbjct: 252 RGVTEKIGSVFSG---QNEVSEVLTEIHKIDANFDKQEWLRFCETKIIPNILEAFIRFDL 308

Query: 329 EILKDWCYEGVFNILATPIKQCKQLGYRL-DSKILDIEQIELVMGKMMDQGPVLVITFQS 153
           E+L+ WC+E  +  L+T +K+ +++ +   DS+I+DI ++E+  GKMM+QGPVL+I+FQ 
Sbjct: 309 EVLQSWCHERAYTQLSTVVKEYQKMHFSTKDSRIIDINKVEMATGKMMEQGPVLIISFQV 368

Query: 152 QQIMCVRDGKGNVIEGSPD 96
             I   ++  G V+EG PD
Sbjct: 369 YMINVTKNADGKVVEGDPD 387



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 82  LTXVWVLCRDPQELNPKSAWRLLEL 8
           +  +WVLCRD +E NP  AW+LLE+
Sbjct: 392 INHIWVLCRDVEEYNPALAWKLLEV 416


>Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical
            protein T05H10.5c protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 689  VAEDERTFSPDTETTGVELHKDSKF--YQQWENFKNNNQYVNKVLDWKIKYEESDNPV 522
            +A DERT+SP+     +E  + +    + Q E+F++  + V K  + K + EE  + V
Sbjct: 848  IAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDV 905


>Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical protein
            T05H10.5b protein.
          Length = 984

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 689  VAEDERTFSPDTETTGVELHKDSKF--YQQWENFKNNNQYVNKVLDWKIKYEESDNPV 522
            +A DERT+SP+     +E  + +    + Q E+F++  + V K  + K + EE  + V
Sbjct: 853  IAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDV 910


>Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical protein
            T05H10.5a protein.
          Length = 980

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 689  VAEDERTFSPDTETTGVELHKDSKF--YQQWENFKNNNQYVNKVLDWKIKYEESDNPV 522
            +A DERT+SP+     +E  + +    + Q E+F++  + V K  + K + EE  + V
Sbjct: 849  IAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDV 906


>AF022971-1|AAG23975.1|  380|Caenorhabditis elegans Hypothetical
           protein C31B8.4 protein.
          Length = 380

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = -1

Query: 615 LSAVGELQEQQSVC**GFRLENQIRRIG---QSSGEGVA-AAHRKDGKSVREHV*KD*TI 448
           +  +  L+EQQ  C      EN++R +    + S +G+A AA   DG+        D  I
Sbjct: 1   MGRIENLREQQDKCRGDH--ENRLREMETEREKSNQGIADAASAADGRLNAARQENDRQI 58

Query: 447 ENVDGNL*NRPELHRTEISRR 385
             +   + N  E+H  EISR+
Sbjct: 59  RELMAKVDNENEMHSDEISRK 79


>AL117207-16|CAH60778.1|  402|Caenorhabditis elegans Hypothetical
           protein Y60A3A.24 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 129 VSDTHYLLRLERDDEDRPLVHHLAHHQLDLFDVEDLGVQPIPQ 257
           + + + L +L +   +R LV H A H+     +ED G + IP+
Sbjct: 52  IPEQYQLAKLNQQRAERQLVEHNAFHRAQALLLEDDGQRSIPE 94


>Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical
           protein C27H6.3 protein.
          Length = 660

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/79 (21%), Positives = 36/79 (45%)
 Frame = -2

Query: 683 EDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRASRL 504
           E++  F  D E   V+  +D +   +  +  + N+ + ++ D + + EES    +    L
Sbjct: 37  ENDDEFEDDDELENVDELEDDELSSEEVDIPSENEVIVELHDGQAEVEESLLDALLGKAL 96

Query: 503 LTEKMGSLFGNMFEKTELS 447
             ++M S    +FE  + S
Sbjct: 97  AGDQMNSRIEGLFEDLDSS 115


>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -2

Query: 626  DSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRASRL-LTEKMGSLFGNMFEKTEL 450
            +SKF +Q+  F+N N++V  V+   + YE+ +N  +  +   +T ++ S       KT +
Sbjct: 1146 ESKF-RQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVAS------TKTFV 1198

Query: 449  SKTLTEICKIDPNFTAQKFLEDCANDIIPN 360
             + + ++  + P FT   F      ++ PN
Sbjct: 1199 VE-VRDVNDVVPQFTVDLFTGTIDEEMTPN 1227


>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -2

Query: 626  DSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRASRL-LTEKMGSLFGNMFEKTEL 450
            +SKF +Q+  F+N N++V  V+   + YE+ +N  +  +   +T ++ S       KT +
Sbjct: 1146 ESKF-RQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVAS------TKTFV 1198

Query: 449  SKTLTEICKIDPNFTAQKFLEDCANDIIPN 360
             + + ++  + P FT   F      ++ PN
Sbjct: 1199 VE-VRDVNDVVPQFTVDLFTGTIDEEMTPN 1227


>Z81589-5|CAB04722.1|  233|Caenorhabditis elegans Hypothetical
           protein T08G5.9 protein.
          Length = 233

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +1

Query: 622 ESLCNSTPVVSVSGENVLSSSATSIRFLKATGAM*TRPSSPRGDISFFTTSVACDI 789
           ESL + T +VS +GEN  ++     R  ++T      P+  R +++  TTS + DI
Sbjct: 58  ESLSSETSIVSFTGEN--ANKQKRQRLSESTENSIPEPAFLRSNVTSLTTSESDDI 111


>Z81589-4|CAB04721.1|  256|Caenorhabditis elegans Hypothetical
           protein T08G5.8 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +1

Query: 622 ESLCNSTPVVSVSGENVLSSSATSIRFLKATGAM*TRPSSPRGDISFFTTSVACDI 789
           ESL + T +VS +GEN  ++     R  ++T      P+  R +++  TTS + DI
Sbjct: 81  ESLSSETSIVSFTGEN--ANKQKRQRLSESTENSIPEPAFLRSNVTSLTTSESDDI 134


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 248 RLDSKILDIEQIELVMGKMMDQGPVL 171
           RL+  ++  E IE V+G MMD+ PVL
Sbjct: 745 RLEMDVVLAETIEDVIGAMMDKSPVL 770


>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
            protein W02B9.1b protein.
          Length = 2920

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -2

Query: 626  DSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRASRL-LTEKMGSLFGNMFEKTEL 450
            +SKF +Q+  F+N N++V  V+   + YE+ +N  +  +   +T ++ S       KT +
Sbjct: 1146 ESKF-RQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVAS------TKTFV 1198

Query: 449  SKTLTEICKIDPNFTAQKFLEDCANDIIPN 360
             + + ++  + P FT   F      ++ PN
Sbjct: 1199 VE-VRDVNDVVPQFTVDLFTGTIDEEMTPN 1227


>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
            protein.
          Length = 2920

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = -2

Query: 626  DSKFYQQWENFKNNNQYVNKVLDWKIKYEESDNPVVRASRL-LTEKMGSLFGNMFEKTEL 450
            +SKF +Q+  F+N N++V  V+   + YE+ +N  +  +   +T ++ S       KT +
Sbjct: 1146 ESKF-RQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVAS------TKTFV 1198

Query: 449  SKTLTEICKIDPNFTAQKFLEDCANDIIPN 360
             + + ++  + P FT   F      ++ PN
Sbjct: 1199 VE-VRDVNDVVPQFTVDLFTGTIDEEMTPN 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,597,967
Number of Sequences: 27780
Number of extensions: 419425
Number of successful extensions: 1381
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)