Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17f01r
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 27 0.29
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 26 0.39
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 26 0.39
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 26 0.39
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 23 3.6
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 4.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 8.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 8.4
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.6 bits (56), Expect = 0.29
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E V ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.39
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 692 EVAEDERTFSPDTETTGVELHKDSKFYQQWENFKNNNQYVN-KVLDWKIKYEE 537
E + D R E + ++ Y + N+ NNN Y N K L + I Y E
Sbjct: 65 ERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIE 117
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 23.0 bits (47), Expect = 3.6
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -1
Query: 690 GRRRRKNVFSGHRDDW------SGIAQGLKVLSAVGELQEQQ 583
G R+N+F G D+ + GLKV++ +GE E++
Sbjct: 93 GHSERRNIF-GENDELIAEKVAHALESGLKVIACIGEKLEER 133
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 261 LALLDRGCENVEHALVTPVLQYFQVSSDHSL 353
L +LD G N + +P L F +++ H L
Sbjct: 139 LWILDSGIINNTQPMCSPKLHVFDLNTSHQL 169
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 78 LXCGCCAGTPRSSTPSRR 25
+ C C+ PR + PSR+
Sbjct: 387 MSCVACSPPPRQTPPSRK 404
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 262 LHCLIGVARMLNTPS*HQSFSISKSPLTIASRMFGMISLAQSS 390
L C++ ++R + S SP+T AS+ G + L Q S
Sbjct: 340 LPCILRMSRPSDKEEREAQKSQKPSPVTGASKSHGDLELRQRS 382
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,014
Number of Sequences: 438
Number of extensions: 5066
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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