Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17f01f
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.0  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    24   5.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.2  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/27 (33%), Positives = 20/27 (74%)
 Frame = +3

Query: 309 ENIKEDIAKNKEMKENIKKFREEAQKL 389
           +++K+DIAK  E+++ I++  E  ++L
Sbjct: 418 DDLKKDIAKQGELEKKIQEHTESFEQL 444


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 249  YTIQECRQYSARKGFFSSIIEN 314
            + I  C QY ARKGF  +   N
Sbjct: 1836 FFIDNCLQYEARKGFAGAEANN 1857


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 601 PPQHCEPSSRCPP 563
           P Q C P+  CPP
Sbjct: 45  PEQRCVPTKECPP 57


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 250 TPYKNVGSILQGKDSSH 300
           TP  N G + QG DS+H
Sbjct: 692 TPIPNNGDVHQGGDSNH 708


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,521
Number of Sequences: 2352
Number of extensions: 12392
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)