Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e21f
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071046-1|AAL48668.1|  294|Drosophila melanogaster RE13534p pro...    29   6.4  
AE014298-1791|AAF48184.1|  294|Drosophila melanogaster CG15727-P...    29   6.4  

>AY071046-1|AAL48668.1|  294|Drosophila melanogaster RE13534p
           protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
 Frame = +3

Query: 96  DVDLAESQRIVDGIIENWISRAQLRLSPFDPIVNNEYAGGWHLPGGE-----NILKVRGS 260
           D D  E Q  +DG   +  +RAQLR   F  +      GG H   G      N+ + +  
Sbjct: 87  DTDDVE-QLGLDGAPIDENARAQLRAGDFQQLAQFPSLGGGHFTFGSEREWANVAEGQTK 145

Query: 261 VEGVNAAGFSTFELDSISYNLFTGQLHLSLSLNS-------VAASIDAAEGEVQIFDRKL 419
           +    A+ + T  L  ++  L T  L+  +   +       +AA   AAE    ++ + +
Sbjct: 146 LHTKAASAYFTLNLTRLNVGLQTIPLYKRMDYPASLFTRAQIAAQEKAAERAEAVYQQCI 205

Query: 420 TADASGG 440
             DA+GG
Sbjct: 206 LKDANGG 212


>AE014298-1791|AAF48184.1|  294|Drosophila melanogaster CG15727-PA
           protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
 Frame = +3

Query: 96  DVDLAESQRIVDGIIENWISRAQLRLSPFDPIVNNEYAGGWHLPGGE-----NILKVRGS 260
           D D  E Q  +DG   +  +RAQLR   F  +      GG H   G      N+ + +  
Sbjct: 87  DTDDVE-QLGLDGAPIDENARAQLRAGDFQQLAQFPSLGGGHFTFGSEREWANVAEGQTK 145

Query: 261 VEGVNAAGFSTFELDSISYNLFTGQLHLSLSLNS-------VAASIDAAEGEVQIFDRKL 419
           +    A+ + T  L  ++  L T  L+  +   +       +AA   AAE    ++ + +
Sbjct: 146 LHTKAASAYFTLNLTRLNVGLQTIPLYKRMDYPASLFTRAQIAAQEKAAERAEAVYQQCI 205

Query: 420 TADASGG 440
             DA+GG
Sbjct: 206 LKDANGG 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,433,230
Number of Sequences: 53049
Number of extensions: 550739
Number of successful extensions: 1953
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)