Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e20f
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084166-1|AAL89904.1|  136|Drosophila melanogaster RE40159p pro...    63   4e-10
AE014296-914|AAF47950.2|  136|Drosophila melanogaster CG13704-PA...    63   4e-10

>AY084166-1|AAL89904.1|  136|Drosophila melanogaster RE40159p
           protein.
          Length = 136

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +1

Query: 73  KMAQKKSVLFYFAVILVILSTLTQEVEARRKILRGRRVMTRTYYRGNAVPAWAXXXXXXX 252
           K+A+K S   Y  + LV+L+   QE EA R++ RGRR +TR Y+ G A+P WA       
Sbjct: 2   KLAKKCST--YLVICLVLLACCLQESEATRRVNRGRRTLTRRYFTGLAIPGWALIVCVAV 59

Query: 253 XXXXXXXVLYVVMRKLVLSSETG-SLNTYQPA 345
                   LY +++K++L  E   +  +Y PA
Sbjct: 60  GELLIGGALYFILKKVILDKEPDQTAASYTPA 91


>AE014296-914|AAF47950.2|  136|Drosophila melanogaster CG13704-PA
           protein.
          Length = 136

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +1

Query: 73  KMAQKKSVLFYFAVILVILSTLTQEVEARRKILRGRRVMTRTYYRGNAVPAWAXXXXXXX 252
           K+A+K S   Y  + LV+L+   QE EA R++ RGRR +TR Y+ G A+P WA       
Sbjct: 2   KLAKKCST--YLVICLVLLACCLQESEATRRVNRGRRTLTRRYFTGLAIPGWALIVCVAV 59

Query: 253 XXXXXXXVLYVVMRKLVLSSETG-SLNTYQPA 345
                   LY +++K++L  E   +  +Y PA
Sbjct: 60  GELLIGGALYFILKKVILDKEPDQTAASYTPA 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,600,184
Number of Sequences: 53049
Number of extensions: 496514
Number of successful extensions: 1120
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)