Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17e15r
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 47 4e-06
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 41 2e-04
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 37 0.004
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 33 0.041
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 30 0.38
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 30 0.38
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 29 0.67
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.6
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 28 2.1
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 6.3
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 6.3
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.3
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 6.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 8.3
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 46.8 bits (106), Expect = 4e-06
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 8/159 (5%)
Frame = -3
Query: 565 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 386
D T W+ G + T+L ++G D+ G G +P EL VRW + +F P
Sbjct: 600 DTMTTWEHLRGS---IPTVLTNGISGMAFSGADVAGFFG---NPDAELFVRWYETAIFYP 653
Query: 385 TLQ-YSFV------PWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 227
+ ++ + PW + E + R+ + A S G P+ P +
Sbjct: 654 FFRAHAHIDTKRREPWLYGEPYTSLVRELLRIRYRLLPTWYTAFYNSHTHGFPILYPQFL 713
Query: 226 LDPTDQDALAVWDEFLLGER-VLAAPVLQQGAVSRDVYL 113
+ P D++ A+ D+F +G+ +L PV +YL
Sbjct: 714 MHPEDEEGFAIDDQFYVGDSGLLVKPVTHPSIDKITIYL 752
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 41.1 bits (92), Expect = 2e-04
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Frame = -3
Query: 532 LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ----YSFV 365
+ + ++++L NL G +V D+ G YN + +EL RW+ F+P + +
Sbjct: 680 MVSSISSILTFNLLGIPMVGADVCG---YNGNTDEELCARWMALGAFLPFYRNHNSLGSI 736
Query: 364 PWDHDEEA--VEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVW 191
P + A E R + M + GTP+ P+++ P +V
Sbjct: 737 PQEPFRWASVAEASRSAIEIRYSLLPYWYTLMHTASVDGTPMVRPLFFEFPKQISLASVD 796
Query: 190 DEFLLGERVLAAPVLQ 143
+F++G +L +P L+
Sbjct: 797 KQFMIGTALLISPALE 812
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 36.7 bits (81), Expect = 0.004
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = -3
Query: 565 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 386
D +LW + + ++ ++ N+ G +V D+ G G ++ +EL RW+ F P
Sbjct: 647 DNHSLW---SNMFFSISGMIVFNMMGIPMVGADVCGFLGDSD---EELCSRWMAMGAFSP 700
Query: 385 -------TLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 227
Q S P+ A E R+ ++ M + Q GTP ++
Sbjct: 701 FYRNHNNIYQISQEPYTWSSVA-EASRRAMYIRYSLLPYWYTIMAKASQDGTPALRALFV 759
Query: 226 LDPTDQDALAVWDEFLLGERVLAAPVLQ 143
P D V +F++G+ +L PVL+
Sbjct: 760 EFPNDPTLADVDRQFMVGDSLLVTPVLE 787
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 33.5 bits (73), Expect = 0.041
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 859 WNNNGSLPGYIDFTNPDAAEWYTSRIQDLIDTYDIDSLKFDA 734
W ++G L +D + D + + + + LI YD D L+ DA
Sbjct: 189 WQDSGVLLADLDVESSDVSSYLSDHFKSLISKYDFDGLRIDA 230
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 631 RTWQRLSRKTQPRDQDGDQCRRSVLESVETN*IRQRRTS 747
+ W+ S +T PR+ D+ SV E VE RQ+R S
Sbjct: 23 KDWKDASVETTPRETSVDEDNTSVFEDVEAQDSRQKRFS 61
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 30.3 bits (65), Expect = 0.38
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Frame = -3
Query: 565 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 386
D +LW + + + L N+ G +V D+ G G + +EL RW+ F+P
Sbjct: 669 DNYSLW---SNMIFSIPGALTFNMVGLPMVGADVCGFMGNTD---EELCSRWMALGAFLP 722
Query: 385 TLQ-------YSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 227
+ S P+ E E R ++ M + +G P+ P+++
Sbjct: 723 FYRNHNSLGSISQEPY-RWESVAESSRCAMNIRYSLLPYWYTLMYEASSQGLPLIRPLFF 781
Query: 226 LDPTDQDALAVWDEFLLGERVLAAPVLQ 143
P + +F++G +L PVL+
Sbjct: 782 EFPNEPSLANADRQFMVGSALLVTPVLE 809
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = -3
Query: 511 LLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQYSFVPWDHDEEAVEI 332
+++ ++ Y+L+L + E + +L+ Q + ++P +PWDH +
Sbjct: 87 VMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQ 146
Query: 331 CRKYTHLHAE 302
YT H E
Sbjct: 147 EDAYTGQHGE 156
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 304 EYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLL-GERVLAAPVLQQGAVS 128
+Y D + A A+ Q G L+ D ++L++W +F+L G + P+ G++S
Sbjct: 48 KYIDALFLASSATTQTG---------LNSVDLNSLSIWQQFILYGFTAITVPIWMHGSIS 98
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 871 ESTWWNNNGSLPGYIDFTNPDAAEWYTSRIQDLIDTYDIDSLKFDA 734
++ W + L +D N I++++ YDID ++FDA
Sbjct: 189 QNCWLGDENLLLADVDTENEVVLSVLEKWIKNVVQEYDIDGIRFDA 234
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 868 STWWNNNG--SLPGYI-DFTNPDAAEWYTSRIQDLIDTYDIDSLKFDAGESSWS 716
STWWN G +P ++ +F N + + + D + + D K E +S
Sbjct: 463 STWWNREGYYQIPEHMNEFNNEEPTRYTSLESCDFLIDLEFDHSKATVNEPIYS 516
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 394 FMPTLQYSFVPWDHDEEAVEICRKYTHLH 308
F+P + + + D E+A+++ + Y HLH
Sbjct: 856 FLPEIVRALLLLDKREQAIDLVKTYGHLH 884
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 163 LAAPVLQQGAVSRDVYLPRGSWRDGVTGELHQGPXVAT 50
+AAP G VS + RG+W + H+GP T
Sbjct: 239 IAAPNAMNGPVSCVSIIERGTWTSEINLIGHEGPVEVT 276
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 230 PDGRVHGSSFLDGRLHSGHDLISIFGVKMRVFAADFY 340
P+G+ H S + G +++ ++ +IFG M F DF+
Sbjct: 84 PNGKGHYPSGIRGLVNAASNIGNIFGQLMFGFMGDFF 120
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 873 LNLPGGTTTALYPGTLTSPTLMLQNGTRQGSKILLIPTILTA 748
L L G L P + SPT + G S L++PT ++A
Sbjct: 719 LRLQKGKNNILSPPSFQSPTALGDPGDNIASSPLILPTSVSA 760
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,055,839
Number of Sequences: 5004
Number of extensions: 94724
Number of successful extensions: 281
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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