Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17e13r
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0674 - 21745321-21746223,21746229-21747608 36 0.043
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 33 0.23
01_01_1143 - 9064210-9065682 33 0.23
03_02_0340 + 7635354-7635621,7635992-7636121,7636865-7636929,763... 33 0.30
02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133 32 0.70
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 30 2.8
02_01_0216 + 1427490-1427789 30 2.8
02_01_0214 + 1420112-1420402 30 2.8
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 29 3.7
07_03_1107 - 24024387-24024497,24025799-24026410 29 3.7
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 29 3.7
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 4.9
06_01_0410 + 2928382-2930973 29 4.9
02_02_0249 - 8288401-8288787 29 4.9
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 4.9
11_06_0202 - 21184217-21184503,21184622-21184982 29 6.5
09_04_0108 + 14657020-14657193,14659040-14659355,14659728-146598... 29 6.5
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 6.5
07_03_0451 + 18340166-18340533,18340576-18341006,18343057-183431... 29 6.5
06_03_0024 - 15563574-15563632,15563887-15563914,15564017-155642... 29 6.5
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 29 6.5
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 29 6.5
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 29 6.5
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 29 6.5
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 28 8.6
07_01_0479 + 3606663-3607448 28 8.6
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 28 8.6
05_07_0256 + 28713134-28713964 28 8.6
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 35.9 bits (79), Expect = 0.043
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 3/182 (1%)
Frame = -1
Query: 761 STP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTI 582
ST G ++ P+ PLS+ST T+ LSS +P L T TD + TT
Sbjct: 582 STATGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGELSTPTDKIPTTTR 641
Query: 581 LPPLASRMSVAPSATFWFGSSTMLEAIGTKCIXXXXXXXXXXXVMPDAKPVVAPHALQVW 402
L++ S P+A ST I + + + +V
Sbjct: 642 AGDLSTATSKIPTAPGTSELSTTTSKISSTSCAGQFSTSTYGIPTTTCTSKLTASSCKVS 701
Query: 401 TPPDHSGEETLTHSTAMLVITSNASTRTGVLLVF-STPAVMPTSTR--MAAGTPNPDAGS 231
+P +G + ST+ TS ++ T F +T ++PT+T +A+ T A S
Sbjct: 702 SP---TGACKFSTSTSTFTPTSFSNDLTASTSTFPTTTRLIPTATSRPIASATGTIVASS 758
Query: 230 TP 225
+P
Sbjct: 759 SP 760
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.5 bits (73), Expect = 0.23
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = -3
Query: 441 RQAGGRPARVTGLDPAGPQWGGNSNALNRNAGHYVECIHTDGRALGIFNPSGDA-DFYPN 265
RQA G+ TG+ ++ +N+L+ I L + SGD +F+P
Sbjct: 518 RQAMGQFEHFTGMPVVDCKFRALANSLDNPDAMKAAGITAHKARLWLHERSGDLIEFHPR 577
Query: 264 GGRNPQPGCRINTCSHGRATELMASSVRTNHLVGRRCGNI-WEAELSNCNGGTLHMGNGN 88
GR QPG G + +A++ H + G++ + + G+ +G N
Sbjct: 578 SGRGMQPGHGGALYHFGTSGAAVAAATAVTHPLA--LGSVRYSSSSVGLGNGSKEIGLQN 635
Query: 87 FGKRGSGL 64
+G SGL
Sbjct: 636 WGADDSGL 643
>01_01_1143 - 9064210-9065682
Length = 490
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 573 AGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDPA 394
AG P V ALG L ++ + GG +++G + N G AG + + G+ A
Sbjct: 403 AGGPGVNPALGQALTAILASQGGGLGLNNILGVGANGSGLPNPGASAGLGSSGLPGMPGA 462
Query: 393 GPQWGG 376
G GG
Sbjct: 463 GGYLGG 468
>03_02_0340 +
7635354-7635621,7635992-7636121,7636865-7636929,
7637255-7637529,7640204-7640441,7641095-7641228,
7641340-7641414,7641675-7641776,7642154-7642263,
7642334-7642430
Length = 497
Score = 33.1 bits (72), Expect = 0.30
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 394 GGVQTCNAC-GATTGLASGITNDVST*TEANKMHLVPIASSIVDEPNQKVAEGATDIR 564
GGV+ AC A G + V+ ++ +HLVPI+ S D ++ V G TD+R
Sbjct: 235 GGVRVDGACEAAVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVR 292
>02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133
Length = 474
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 392 DHSGEETLTHSTAMLVITSNASTRTGVLLVFSTPAVMPTS---TRMAAGTPNPDAGSTP 225
D +G++T+ H+TA+ + + AS+ + + P+V+P + R + P DA S P
Sbjct: 129 DGTGKDTIEHATALGGLKATASSDVAPVPIDDVPSVVPAANAPVRSSPVMPAADAASAP 187
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 314 RPSVWMHST**PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCT 493
RP + +H T P L + + PP P S T PPA P +PT AP T
Sbjct: 262 RPLLLLHCTLAPHLCVPRVLSPP--APMPSALATHVPTPPAPAPPVPTPLAP-------T 312
Query: 494 WFQLPPALLMSQT 532
+PP MS T
Sbjct: 313 PADVPPGFTMSPT 325
>02_01_0216 + 1427490-1427789
Length = 99
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 157 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 297
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 27 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGAGAAGAAGAGVGAGI 73
>02_01_0214 + 1420112-1420402
Length = 96
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 157 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 297
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 24 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGANAAGAAGAGVGAGI 70
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 261 GRNPQPGCRINTCSHGRATELMASSVRTNHL 169
G++ +PGC +NTC+H RA L SV +
Sbjct: 264 GKDGRPGCVMNTCAH-RACPLHLGSVNEGRI 293
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +2
Query: 380 PHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPT 559
P P + P A PPA P P T AP P + PP P+A
Sbjct: 46 PAAAPTTTTPPA-ASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKA 104
Query: 560 SGTPAAA 580
+ PA++
Sbjct: 105 TPPPASS 111
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -3
Query: 603 LANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGR 424
+ N T + V D + +F+ + GG+ NQ++L+G S GAH+ A + +
Sbjct: 225 IGNFPQGTISDMVSDASDGI-SFVCETVGAYGGDPNQIYLMGQSAGAHIAACALLEQAAK 283
Query: 423 PAR 415
+R
Sbjct: 284 ESR 286
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Frame = -3
Query: 354 NAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQPGCRINTCS-HGRATELMASSVRT 178
N G Y H G G SG A NGG G +CS G + + +S+
Sbjct: 74 NGGSYTASGHGLGLGSGYGYGSGSAYGAGNGGSASGCGSGSTSCSGSGSGSVGLGTSINV 133
Query: 177 NHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSGLYGLRTR 46
VG G ++ +G G+ GSG R+R
Sbjct: 134 GVGVGANGGTNGGSDCDTGSGSNYGSSTGSSSGYGSGGVSYRSR 177
>06_01_0410 + 2928382-2930973
Length = 863
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 362 SALEFPPHCGPAGSKPVTRAGRPPA--WRPALP 454
S LE P HC GS V RA PP WR A+P
Sbjct: 365 STLEVPYHCFVLGS--VCRASSPPVPLWRVAVP 395
>02_02_0249 - 8288401-8288787
Length = 128
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -2
Query: 448 CRTP-SRWSPRTRYRFGPRRTTVGRKL*RTQPQCWSLRRMHPHGRACSWYFQPQR*CRLL 272
CR P S + R TT + PQ W LRR P W+ +R R +
Sbjct: 14 CRAPWINSSGLGKRRIDDGHTTGSSRFDGCAPQEWRLRR--PQSPGTKWWIDRRRHAREV 71
Query: 271 PEWRQEPPTRMPDQHLLTRSR 209
W+ + R D+ + + R
Sbjct: 72 ANWQSKRCARGGDESTIQQPR 92
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.1 bits (62), Expect = 4.9
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 377 PPHCGPAGSKPVTRAGRPPAWRPALPTT*AP-KLKPIRCTWFQLPPALLMS-----QTKK 538
PP P+ S T + PPA RPALP T AP + P T QL PA S +
Sbjct: 138 PPAKAPSHSHAKTPS-MPPAERPALPPTKAPAAISP--ATPPQLSPANAHSTHHHAKPPS 194
Query: 539 LPRARPTSGTPA 574
LP A P +P+
Sbjct: 195 LPPAEPPVPSPS 206
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 371 EFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APK---LKPIRCTWFQLPPALLMSQTKKL 541
E PP P+ A P A RPA+P PK + P++ Q PPA
Sbjct: 208 EHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPP--QRPPAPATKPPPSF 265
Query: 542 -PRARPTSGTPAAA 580
P+ PT PA A
Sbjct: 266 PPQLAPTMPPPAHA 279
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = +2
Query: 347 PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMS 526
P S+ + PP G P + P P+LP P P + LPP
Sbjct: 127 PPYEPSSPQQPPSAGKLAESPAATPAQSPTAAPSLPQAPKPSSPPPFTSPSPLPPPPPPP 186
Query: 527 QTKKLPRARPTSGTPAAAV 583
+ A GT AAAV
Sbjct: 187 TSHGARGATMGIGTVAAAV 205
>09_04_0108 +
14657020-14657193,14659040-14659355,14659728-14659887,
14661265-14661725,14663778-14663856,14664732-14664882,
14665414-14665467,14665724-14665888
Length = 519
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = -3
Query: 621 VVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINN----AGGNWNQVHLIGFSLGAHVV 454
+VDW L S+ + DV + NFLV LIN+ +V ++G G H
Sbjct: 124 IVDWPGLGYSDRPSLNYNA-DV---MENFLVQLINSPNSPVANTDGEVVVVG---GGHAA 176
Query: 453 GNAGRQAGGRPARVTGLDPAGPQWGG 376
A R AG R +G+ P W G
Sbjct: 177 TIAVRAAGKGLIRPSGIAAVAPTWAG 202
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 512 ALLMSQTKKL-PRARPTSGTPAAAVL*FELASLCQSTTMT 628
+L+ S T+ L P+A PTS AA V +L SLC T
Sbjct: 527 SLISSNTENLSPQALPTSSESAAGVTIDDLRSLCSQEFFT 566
>07_03_0451 +
18340166-18340533,18340576-18341006,18343057-18343184,
18343329-18343958,18344761-18345480
Length = 758
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 236 GSTPAHTVAPLN*WHPVFVLTTWLED 159
GSTP H A L W V +L+ W D
Sbjct: 342 GSTPLHLAASLEGWPYVGILSKWFPD 367
>06_03_0024 -
15563574-15563632,15563887-15563914,15564017-15564202,
15564283-15564332,15564435-15564691,15564772-15564910,
15565627-15565716,15567354-15567663
Length = 372
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 757 LREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRE 629
+ + F P QP +R P + + PDEP H+ P S+ E
Sbjct: 177 IHQSFEEPDQPVHRTETPALGYHAE-PDEPIHRTEAPALSQPE 218
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 28.7 bits (61), Expect = 6.5
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = -3
Query: 540 NFLVWLINNAGGNWNQVH-LIGFSLGAHVVGNAGRQAGGRPAR-VTGLDPAGPQWGGNSN 367
N + W NNA N +H LI LG++ AG Q R AR T +P
Sbjct: 307 NLVEWAHNNA--NDRSIHRLIDPGLGSNF-SMAGAQILARTARSCTRQNP-------RDR 356
Query: 366 ALNRNAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQP 244
L H +E +HTD RA + S P+ NP P
Sbjct: 357 PLMSEVVHTLETLHTDQRANATTSYSYSQSQPPSPSANPSP 397
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +1
Query: 259 AAIR--VEVGITAGVENTKSTPVRVDAFDV-MTSIAVECVRVSSPLWSGGVQTCN--ACG 423
A+IR V V A V K RV A + + + C SS L +GG C C
Sbjct: 2 ASIRSCVSVNPAAAVTPVKYKSARVGAAGLDPKGLRISCSSSSSSLAAGGGDGCRDAGCA 61
Query: 424 ATTGLASGITNDV 462
+++G SG+ V
Sbjct: 62 SSSGRGSGVVGSV 74
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +1
Query: 358 VECVRVSSPLWSGGV----QTCNACG 423
VEC ++P+W GG CNACG
Sbjct: 28 VECGATTTPMWRGGPTGPRSLCNACG 53
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 611 GTDLLIQTTILPPLASRMSVAPSATFWFGSSTMLEAIGTK 492
G D+LI T A+ +V P A+F FG++ A GT+
Sbjct: 10 GGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTE 49
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +2
Query: 518 LMSQTKKLPRARPTSGTPAAAVL*FELASLCQSTTMTFTS*TARKADLMRGFIWVLPLLF 697
L Q +++ + GTP A V +++ C S + T + ++ DL+ G + V+P
Sbjct: 518 LTVQKRRITPSTDFLGTPVAEVAHWQILDACNSNSHTVPN--VQEIDLLHGKLTVVPASV 575
Query: 698 HPWTMTTVPRLAR*CEFLTELMLP 769
P+ + R+ E L + P
Sbjct: 576 -PFLAILICRICSCSEQLLSFLTP 598
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 377 PPHCGPAGSKPVTRAGRPPAWRPALP 454
PP GP +P G PP RP +P
Sbjct: 212 PPPMGPPQVRPGMPGGPPPGMRPGMP 237
>06_01_0569 +
4019254-4021996,4022121-4022272,4022356-4022427,
4022521-4022673,4022749-4022912,4022990-4023137,
4023530-4023652,4023774-4023861,4023951-4024129
Length = 1273
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 880 PA*XPSTMNYWAPEAAPIIQYWLFTRQNQKQSPGACERQHQLREEFTLPRQPRY 719
P+ P + +AP P + + +Q Q+Q P Q+ + F P+Q +Y
Sbjct: 287 PSHQPPQVASYAPHQQPQVASYAPQQQQQQQQPQVASYIPQMAQSFREPQQVQY 340
>05_07_0256 + 28713134-28713964
Length = 276
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 311 LLVFSTPAVMPTSTRMAAGTPNPDAGSTPAHTVAPLN*WHPVFVL 177
L + S T+ A + + AGSTPA T AP P+F++
Sbjct: 76 LSISSNHGTTTTAAAAAVSSDSAGAGSTPASTTAPPAASFPLFIV 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,089,722
Number of Sequences: 37544
Number of extensions: 760225
Number of successful extensions: 2654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2646
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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