Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e10f
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens ...    36   0.18 
BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.        35   0.31 
BC041691-1|AAH41691.1|  403|Homo sapiens F-box protein 22 protein.     31   3.8  
BC032540-1|AAH32540.1|  403|Homo sapiens F-box protein 22 protein.     31   3.8  
BC020204-1|AAH20204.2|  403|Homo sapiens Unknown (protein for MG...    31   3.8  
AY005144-1|AAF89095.1|  403|Homo sapiens F-box protein FBX22p44 ...    31   3.8  
AK223500-1|BAD97220.1|  403|Homo sapiens F-box only protein 22 i...    31   3.8  
AK024048-1|BAB14798.1|  276|Homo sapiens protein ( Homo sapiens ...    31   3.8  
AF174602-1|AAF04523.1|   81|Homo sapiens F-box protein Fbx22 pro...    31   3.8  
AL109915-2|CAB89292.1|  902|Homo sapiens synaptosomal-associated...    31   5.1  
AB014556-1|BAA31631.2|  912|Homo sapiens KIAA0656 protein protein.     31   5.1  

>AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35107 fis, clone PLACE6006871, moderately
           similar to SUPPRESSOR PROTEIN SRP40. ).
          Length = 258

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
 Frame = -3

Query: 446 LRSYLPASNAMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV 267
           L S +P+S++ + +SPS     S  S+   S+     S+  S  +S SS    SP S   
Sbjct: 51  LSSSIPSSSS-SSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNS 109

Query: 266 *SSTERRSN*NGSKTGNVSDPVIMVCLKRSSIERISAS--KSRLSPSSGFSKNWIIALAP 93
            SS+   S+ + S + + S P        SS    S+S   S  SPSS  S +   + +P
Sbjct: 110 -SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 168

Query: 92  TTSFLGYAAASPRAATN 42
           ++S    + +SP ++ +
Sbjct: 169 SSSSPSSSGSSPSSSNS 185


>BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.
          Length = 257

 Score = 34.7 bits (76), Expect = 0.31
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
 Frame = -3

Query: 446 LRSYLPASNAMTGTSPSIERPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV 267
           L S +P+S++ + +  S     SP S+   S+     S+  S  +S SS    SP S   
Sbjct: 51  LSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSS--SSSTSSPSSSSSSSSSSPSSSNS 108

Query: 266 *SSTERRSN*NGSKTGNVSDPVIMVCLKRSSIERISAS--KSRLSPSSGFSKNWIIALAP 93
            SS+   S+ + S + + S P        SS    S+S   S  SPSS  S +   + +P
Sbjct: 109 -SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 167

Query: 92  TTSFLGYAAASPRAATN 42
           ++S    + +SP ++ +
Sbjct: 168 SSSSPSSSGSSPSSSNS 184


>BC041691-1|AAH41691.1|  403|Homo sapiens F-box protein 22 protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>BC032540-1|AAH32540.1|  403|Homo sapiens F-box protein 22 protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>BC020204-1|AAH20204.2|  403|Homo sapiens Unknown (protein for
           MGC:31799) protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AY005144-1|AAF89095.1|  403|Homo sapiens F-box protein FBX22p44
           protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AK223500-1|BAD97220.1|  403|Homo sapiens F-box only protein 22
           isoform a variant protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AK024048-1|BAB14798.1|  276|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13986 fis, clone Y79AA1001923, weakly similar to
           Homo sapiens F-box protein Fbx22 (FBX22) gene. ).
          Length = 276

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AF174602-1|AAF04523.1|   81|Homo sapiens F-box protein Fbx22
           protein.
          Length = 81

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = -3

Query: 377 PRSTEIISNVKELISNVLSFLTSKS 303
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 16  PRSTFVLSNLAEVVERVLTFLPAKA 40


>AL109915-2|CAB89292.1|  902|Homo sapiens synaptosomal-associated
           protein, 91kDa homolog (mouse) protein.
          Length = 902

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 31/101 (30%), Positives = 45/101 (44%)
 Frame = +1

Query: 1   ETVIGITNMRFVCIFVAALGLAAAYPKNDVVGANAIIQFLENPDEGESLDFEALILSMLE 180
           E   G+ N  F+ +F   + L A Y  ND V  N + +F E   +G+  D     L + +
Sbjct: 187 ELTNGVINAAFMLLFKDLIKLFACY--NDGV-INLLEKFFEMK-KGQCKD----ALEIYK 238

Query: 181 RFRQTMITGSETLPVLDPFQLDRLSVDDQTIPLPGLRMTLE 303
           RF   M   SE L V +   +D+  + D T     L  TLE
Sbjct: 239 RFLTRMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLE 279


>AB014556-1|BAA31631.2|  912|Homo sapiens KIAA0656 protein protein.
          Length = 912

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 31/101 (30%), Positives = 45/101 (44%)
 Frame = +1

Query: 1   ETVIGITNMRFVCIFVAALGLAAAYPKNDVVGANAIIQFLENPDEGESLDFEALILSMLE 180
           E   G+ N  F+ +F   + L A Y  ND V  N + +F E   +G+  D     L + +
Sbjct: 192 ELTNGVINAAFMLLFKDLIKLFACY--NDGV-INLLEKFFEMK-KGQCKD----ALEIYK 243

Query: 181 RFRQTMITGSETLPVLDPFQLDRLSVDDQTIPLPGLRMTLE 303
           RF   M   SE L V +   +D+  + D T     L  TLE
Sbjct: 244 RFLTRMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLE 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,995,485
Number of Sequences: 237096
Number of extensions: 2017555
Number of successful extensions: 4117
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4114
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)