Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17e10f
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 31 1.0
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.4
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 29 2.4
AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical... 29 2.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 3.1
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 3.1
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 29 4.1
U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical pr... 29 4.1
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 28 5.4
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 28 5.4
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 28 5.4
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 5.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 9.5
U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding pro... 27 9.5
U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein. 27 9.5
AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and gl... 27 9.5
AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and gl... 27 9.5
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 504 DHADFRFTIAVYCEAQSSHAEIVFTSVQRNDWYFSVDRKAE 382
DH D +T++V + H E+ + N W F V+ K++
Sbjct: 56 DHFDEYYTVSVRIGTPAQHFEVALDTTSSNLWVFGVECKSQ 96
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Frame = -3
Query: 476 PYIVKP-KAVTLRSYLPASNAMT---GTSPSIERPKSP 375
P++ K +A+T +SY+PAS A T T+P +++ K+P
Sbjct: 64 PFVDKVFEALTSKSYMPASTAPTSASATAPDLKKEKAP 101
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 621 GYFSLKTFKANSNVRFLEIQGHSFTDIQVDQQSRLDTRT--DHADFRFTIAVYCEAQSSH 448
G FS+ K+ S L +G ++ QQ + DH D +T V + H
Sbjct: 106 GQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVSFFDHFDEYYTAGVRIGTPAQH 165
Query: 447 AEIVFTSVQRNDWYFSVDRKAE 382
++ F + N W F V+ +++
Sbjct: 166 FQVAFDTTSSNLWVFGVECRSQ 187
>AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical
protein Y41D4B.6 protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = -3
Query: 389 RPKSPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV*SSTERRSN*NGSKTGNVS 210
+ K S + +++ LIS++ +F++ S +I + S +E N G+K +
Sbjct: 198 KSKESNSDALGNSISRLISSLKNFISGGRSSIIPGISVTMSRSDSESEKNDEGNKNEENT 257
Query: 209 DPVIMVCLKRSSIERISASKSRLSPSSGFS 120
D I K S + I S R SP + FS
Sbjct: 258 DSGI---TKHSRLSEILGSMRR-SPPASFS 283
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 464 KPKAVTLRSYLPASNAMTGTSPSIERPKSPRST 366
KP VT + LP++ A T T + P SP++T
Sbjct: 542 KPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTT 574
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 464 KPKAVTLRSYLPASNAMTGTSPSIERPKSPRST 366
KP VT + LP++ A T T + P SP++T
Sbjct: 383 KPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTT 415
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 464 KPKAVTLRSYLPASNAMTGTSPSIERPKSPRST 366
KP VT + LP++ A T T + P SP++T
Sbjct: 423 KPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTT 455
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/84 (34%), Positives = 37/84 (44%)
Frame = -3
Query: 380 SPRSTEIISNVKELISNVLSFLTSKSSRVIRSPGSGIV*SSTERRSN*NGSKTGNVSDPV 201
S S+ +S SN+ S S+ RS GS SS+ RRS+ NGS + + S
Sbjct: 80 SKTSSSTVSCTSLGSSNISSSSRQPSNGSFRSSGSSNGSSSSSRRSS-NGSSSSSGSTSD 138
Query: 200 IMVCLKRSSIERISASKSRLSPSS 129
SS R S SR S SS
Sbjct: 139 NSSSNISSSSRRSSNGSSRSSSSS 162
>U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical
protein C37A2.8a protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 205 GSETLP-VLDPFQLDRLSVDDQTIPLPGLRMTLEDLEVRKLST 330
G E LP +++P + +D +IPLPG + T E+ R + +
Sbjct: 260 GLELLPEIVEPVAVPASQIDLNSIPLPGQKETPEERHARLMKS 302
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -3
Query: 605 KPSRLIATSASWRFRAIPSRIFKWINRVALIRGRITRIFASPLPYIVKPKAVTLRSYLPA 426
+P +A+S +R +P+R I L+ + +S Y T S+LP
Sbjct: 387 RPHEFMASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLPI 446
Query: 425 SNAMT 411
N MT
Sbjct: 447 RNTMT 451
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -3
Query: 605 KPSRLIATSASWRFRAIPSRIFKWINRVALIRGRITRIFASPLPYIVKPKAVTLRSYLPA 426
+P +A+S +R +P+R I L+ + +S Y T S+LP
Sbjct: 387 RPHEFMASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLPI 446
Query: 425 SNAMT 411
N MT
Sbjct: 447 RNTMT 451
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -3
Query: 605 KPSRLIATSASWRFRAIPSRIFKWINRVALIRGRITRIFASPLPYIVKPKAVTLRSYLPA 426
+P +A+S +R +P+R I L+ + +S Y T S+LP
Sbjct: 387 RPHEFMASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLPI 446
Query: 425 SNAMT 411
N MT
Sbjct: 447 RNTMT 451
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -3
Query: 605 KPSRLIATSASWRFRAIPSRIFKWINRVALIRGRITRIFASPLPYIVKPKAVTLRSYLPA 426
+P +A+S +R +P+R I L+ + +S Y T S+LP
Sbjct: 291 RPHEFMASSIMMDYRLMPTRQSSAITSQMLMLSQSASTLSSQPQYATSTHYSTNNSFLPI 350
Query: 425 SNAMT 411
N MT
Sbjct: 351 RNTMT 355
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 486 SENPRDPSSYQGDSVDPLEYP*RNGPESP 572
S P DPS SV+P E P +GP SP
Sbjct: 150 SPGPVDPSEDPQPSVEPSEDPQPSGPPSP 178
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/123 (20%), Positives = 52/123 (42%)
Frame = +1
Query: 118 LENPDEGESLDFEALILSMLERFRQTMITGSETLPVLDPFQLDRLSVDDQTIPLPGLRMT 297
LEN + L++ +++ E + + +++ +P R S+ +I P RM
Sbjct: 784 LENNETMNELEYVDYLINKTEEMTRKLNESTDSDDYRNPLSSGRGSMTSSSINEP--RMF 841
Query: 298 LEDLEVRKLSTFEINSLTFDIISVLRGLFGLSIDGEVPVIALDAGKYDLSVTALGFTIYG 477
+ + + + I +L + R FG+ + + ++ LS G T+YG
Sbjct: 842 ISTMSTPRRTPSRIPALMTKSLHAPRK-FGIFMKFQKFLVDFQNYDRSLSTPQRGATVYG 900
Query: 478 NGE 486
+GE
Sbjct: 901 SGE 903
>U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding
protein LAG-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -3
Query: 506 RITRIFASPLPYIVKPKAVTLR------SYLPASNAMTGTSPSIERPKSPRSTEIISNVK 345
+I I SP P + P A +R S+ ++ GT+ + SP +++ +
Sbjct: 86 KIDTISKSPTPELASPSAKRMRLSPSTSSHSDVASTSKGTNGQDQSKNSPTNSDPFYTIG 145
Query: 344 ELISNVLSFL-TSKSS 300
+ N SFL TS SS
Sbjct: 146 QSTPNTSSFLDTSNSS 161
>U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -3
Query: 506 RITRIFASPLPYIVKPKAVTLR------SYLPASNAMTGTSPSIERPKSPRSTEIISNVK 345
+I I SP P + P A +R S+ ++ GT+ + SP +++ +
Sbjct: 86 KIDTISKSPTPELASPSAKRMRLSPSTSSHSDVASTSKGTNGQDQSKNSPTNSDPFYTIG 145
Query: 344 ELISNVLSFL-TSKSS 300
+ N SFL TS SS
Sbjct: 146 QSTPNTSSFLDTSNSS 161
>AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform b protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -3
Query: 506 RITRIFASPLPYIVKPKAVTLR------SYLPASNAMTGTSPSIERPKSPRSTEIISNVK 345
+I I SP P + P A +R S+ ++ GT+ + SP +++ +
Sbjct: 84 KIDTISKSPTPELASPSAKRMRLSPSTSSHSDVASTSKGTNGQDQSKNSPTNSDPFYTIG 143
Query: 344 ELISNVLSFL-TSKSS 300
+ N SFL TS SS
Sbjct: 144 QSTPNTSSFLDTSNSS 159
>AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform a protein.
Length = 673
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -3
Query: 506 RITRIFASPLPYIVKPKAVTLR------SYLPASNAMTGTSPSIERPKSPRSTEIISNVK 345
+I I SP P + P A +R S+ ++ GT+ + SP +++ +
Sbjct: 86 KIDTISKSPTPELASPSAKRMRLSPSTSSHSDVASTSKGTNGQDQSKNSPTNSDPFYTIG 145
Query: 344 ELISNVLSFL-TSKSS 300
+ N SFL TS SS
Sbjct: 146 QSTPNTSSFLDTSNSS 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,421,785
Number of Sequences: 27780
Number of extensions: 313714
Number of successful extensions: 891
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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