Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17e06r
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0430 + 3320198-3320215,3320496-3320642,3321157-3321268,332... 194 8e-50
10_08_0024 - 14238028-14238091,14238193-14238263,14238607-142387... 192 3e-49
10_08_0025 - 14243249-14243377,14243935-14244174,14244266-142443... 181 6e-46
04_03_0484 + 16455597-16455809,16456417-16456537,16456728-164568... 163 2e-40
02_03_0283 + 17267199-17267334,17267424-17267959 34 0.13
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170... 33 0.30
09_02_0535 - 10346395-10346705,10347100-10347175,10348931-103490... 32 0.52
02_03_0282 - 17264970-17265505,17265665-17265779 32 0.68
02_03_0284 + 17275004-17275675 30 2.1
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 30 2.8
07_03_0750 - 21226896-21227011,21227116-21227370,21227469-212287... 29 4.8
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 29 4.8
08_01_0584 + 5180531-5180651,5180816-5181354 29 6.4
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 29 6.4
08_02_0914 - 22546100-22546759 28 8.4
04_04_1436 + 33591570-33591728,33594027-33594101,33594487-335945... 28 8.4
>03_01_0430 +
3320198-3320215,3320496-3320642,3321157-3321268,
3321389-3321504,3321557-3321671,3321791-3321915,
3322145-3322215,3322308-3322368
Length = 254
Score = 194 bits (473), Expect = 8e-50
Identities = 87/146 (59%), Positives = 113/146 (77%), Gaps = 7/146 (4%)
Frame = -1
Query: 862 FKINIDTYKTDGVLEKLKNERGYTYE---DEMV--CS--KECLPNYEEKIKSFYTEHLHT 704
+++N D ++ D L+K++ RGY+Y E+V C E LPNYE K+K+F+ EHLHT
Sbjct: 99 WRLNADDWENDENLKKIREARGYSYMVCISELVDICDVCPEKLPNYEAKLKNFFEEHLHT 158
Query: 703 DEEIRFILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIG 524
DEEIR+ L+GSGYFDVRD DQWIR+AV KG M+V+P+G+YHRFTLD++NYIKA R F+G
Sbjct: 159 DEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVG 218
Query: 523 EPVWLPYNRPADEMPCRKDYVEKLQN 446
EPVW PYNRP D +P RK+YVEK+ N
Sbjct: 219 EPVWTPYNRPHDHLPARKEYVEKIIN 244
>10_08_0024 -
14238028-14238091,14238193-14238263,14238607-14238731,
14238842-14238956,14239076-14239170,14239282-14239393,
14239481-14239490,14239808-14239890,14240044-14240061
Length = 230
Score = 192 bits (468), Expect = 3e-49
Identities = 82/137 (59%), Positives = 107/137 (78%)
Frame = -1
Query: 862 FKINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFI 683
+++N D ++ L++++ RGY+Y D E LPNYE KIKSF+ EHLHTDEEIR+
Sbjct: 81 WRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYC 140
Query: 682 LDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPY 503
L+GSGYFDVRD DQWIRIA+ KG M+V+P+G+YHRFTLDT+NYIKA R F+G+PVW PY
Sbjct: 141 LEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPY 200
Query: 502 NRPADEMPCRKDYVEKL 452
NRP D +P RK+++ KL
Sbjct: 201 NRPHDHLPARKEFLAKL 217
>10_08_0025 -
14243249-14243377,14243935-14244174,14244266-14244360,
14245120-14245198,14249528-14250202,14250288-14250338,
14250439-14250813
Length = 547
Score = 181 bits (441), Expect = 6e-46
Identities = 78/148 (52%), Positives = 111/148 (75%), Gaps = 2/148 (1%)
Frame = -1
Query: 865 YFKINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRF 686
Y+ ++ +++ L K++ ERGY+Y D + L NYEEK+KSFY EH+H DEEIR+
Sbjct: 399 YWHLDPKKSESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRY 458
Query: 685 ILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLP 506
L+GSGYFDVRD +D+WIRI + +GDM+++P+GIYHRF +D+NNYIK R FIGEPVW
Sbjct: 459 CLEGSGYFDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTA 518
Query: 505 YNRPADEMPCRKDYVEKLQ--NGFSVAA 428
YNRP ++ P R++YV+ ++ GF++AA
Sbjct: 519 YNRPQEDHPVRQEYVKNVKGDTGFALAA 546
>04_03_0484 +
16455597-16455809,16456417-16456537,16456728-16456822,
16458633-16458747,16458868-16458992,16459354-16459460,
16459548-16459626
Length = 284
Score = 163 bits (396), Expect = 2e-40
Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 12/150 (8%)
Frame = -1
Query: 859 KINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFIL 680
+++ D ++ D L+ ++ +RGY + D + + E +PNYE IK F+ EHLHTDEE+R+ L
Sbjct: 119 RLDADNHEHDENLKIMREQRGYLHMDIVELTPEKMPNYEVMIKRFFEEHLHTDEEVRYCL 178
Query: 679 DGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIK------------AKR 536
DGSGYFDVRD D+W+R++V KG ++V+P+GIYHRFTLDTNNYIK R
Sbjct: 179 DGSGYFDVRDENDKWVRVSVRKGALIVVPAGIYHRFTLDTNNYIKMGPGGLLFGFLQTMR 238
Query: 535 FFIGEPVWLPYNRPADEMPCRKDYVEKLQN 446
F G P W YNRP D +P RK Y+E L N
Sbjct: 239 LFSGGPDWTAYNRPHDHLPERKKYLEALHN 268
>02_03_0283 + 17267199-17267334,17267424-17267959
Length = 223
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 EIRFILDGSGY--FDVRDGEDQWIRIAVSKGDMLVIPSGIYH-RFTLDTNNYI 548
EI +L+GS Y F + + E++ ++KGD+ V P G+ H +F TNN +
Sbjct: 122 EIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAV 174
>07_03_1462 +
26716197-26716484,26716618-26716746,26716963-26717055,
26717581-26717721,26718021-26718089,26718207-26718290,
26718784-26718964,26719055-26719171,26719245-26719303,
26719595-26719729,26719865-26720014,26720170-26720208
Length = 494
Score = 33.1 bits (72), Expect = 0.30
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 751 NYEEK-IKSFYTEHLHT-DEEIRFILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYH 578
+YEE + S+ E L + +R + GY D+ QW R+ +I I
Sbjct: 274 SYEENDVSSYELEGLESLGSMLRIVSQSDGYVDLSRSTIQWFRVQPEGNKKEIISGAIKQ 333
Query: 577 RFT---LDTNNYIKAKRFFIGEPVWLPYNRPADEMPCRKDYVEKL 452
+ D Y++A+ GE + P D DYVE L
Sbjct: 334 AYAPEPHDVGRYLQAEINHCGEISVVKTAGPVDPAAGLVDYVETL 378
>09_02_0535 -
10346395-10346705,10347100-10347175,10348931-10349070,
10349294-10349578,10349677-10349718,10350963-10351461,
10351557-10351723,10352128-10352412,10352695-10352836
Length = 648
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 638 LILTISHVKVTRAV*DK-PNFLIRMQVLSVKRFYLLLIIRKTFLGTDHLIF 787
L+LT+ H VT+++ + P F +LSV F L+ T+L +H IF
Sbjct: 152 LVLTVHHWTVTQSIYSRTPRFDSNFDILSVTGFISLIKPSSTWLNVEHDIF 202
>02_03_0282 - 17264970-17265505,17265665-17265779
Length = 216
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -1
Query: 715 HLHTDE-EIRFILDGSGY--FDVRDGEDQWIRIAVSKGDMLVIPSGIYH-RFTLDTNNYI 548
H+H EI IL+GS Y F + E++ ++KGD+ V P G+ H +F T + I
Sbjct: 108 HIHPRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVI 167
>02_03_0284 + 17275004-17275675
Length = 223
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 EIRFILDGSGY--FDVRDGEDQWIRIAVSKGDMLVIPSGIYH-RFTLDTNNYI 548
EI +L+GS Y F + E++ ++KGD+ V P G+ H +F T + +
Sbjct: 122 EILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAV 174
>02_05_0490 +
29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 495 RPMRCLAGRTTLRNYR-MDSQWPHNVTKLSFFFQRIYYILVDPADSI 358
R +RC G TT R YR ++ H V KL F R Y L +P SI
Sbjct: 511 RSIRCFPG-TTSRQYRQLEDGGFHTVRKLLQHFPRTYADLQNPQGSI 556
>07_03_0750 -
21226896-21227011,21227116-21227370,21227469-21228785,
21228918-21228984
Length = 584
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 524 TNEETFRFYVVIGVQGKPVVDTARDDQHVSLRHGNTDPLILTISHV 661
+N + R Y V G PVVD A + SL D + I HV
Sbjct: 211 SNGQISRDYAVFGPNASPVVDQASGITYHSLFDAQLDAVYFAIDHV 256
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 754 PNYEEKIKSFYTEHLHTDEEIRFILDGSG 668
P +E I + +TE+L EEIR +LD G
Sbjct: 49 PKIKEAITAKFTEYLRRAEEIRAVLDEGG 77
>08_01_0584 + 5180531-5180651,5180816-5181354
Length = 219
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -1
Query: 697 EIRFILDGSGY--FDVRDGEDQWIRIAVSKGDMLVIPSGIYH-RFTLD 563
EI +L+G+ Y F + +++ ++KGD+ V P G+ H +F LD
Sbjct: 119 EIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFNLD 166
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 754 PNYEEKIKSFYTEHLHTDEEIRFILDG 674
P ++ I + +TE+L EEIR +LDG
Sbjct: 49 PKIKDAIAAKFTEYLRRAEEIRAVLDG 75
>08_02_0914 - 22546100-22546759
Length = 219
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 715 HLH-TDEEIRFILDGS---GYFDVRDGEDQWIRIAVSKGDMLVIPSGIYH 578
H H E+ ++LDG+ G+ D + + VSKG M V P G+ H
Sbjct: 110 HTHPAGSELLYVLDGALVAGFISSSDNKVYYKE--VSKGGMFVFPQGLLH 157
>04_04_1436 +
33591570-33591728,33594027-33594101,33594487-33594543,
33594635-33594795,33594954-33595094,33595344-33595446,
33595535-33595634,33595745-33595983
Length = 344
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 589 RSG*PACLP*TRQYGSIDPHHLSRQSNQS 675
R G P C P +G++DPH +R S
Sbjct: 88 RGGIPICFPQFSNFGNLDPHGFARNRTWS 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,354,618
Number of Sequences: 37544
Number of extensions: 490845
Number of successful extensions: 1026
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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