Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e06r
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68116-3|CAA92175.1|  178|Caenorhabditis elegans Hypothetical pr...   118   4e-27
U80455-6|AAB37884.1|  159|Caenorhabditis elegans Hypothetical pr...    94   1e-19
U23173-1|AAC46708.1|  221|Caenorhabditis elegans Hypothetical pr...    79   3e-15
AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z68116-3|CAA92175.1|  178|Caenorhabditis elegans Hypothetical
           protein F42F12.4 protein.
          Length = 178

 Score =  118 bits (285), Expect = 4e-27
 Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
 Frame = -1

Query: 868 EYFKINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIR 689
           E  K+N D       L++L  +    + DE+   +  +PN++EK+  F+ EHLH D E+R
Sbjct: 36  ECTKVNFDDEHVQEDLDRLIKKYDMNFHDEVHICRATMPNFDEKLDIFFEEHLHDDAELR 95

Query: 688 FILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWL 509
            I  G G+FDVR  ++ WIRI V +GD + +P+GIYHRFT D +  + A R F   P W 
Sbjct: 96  VIKHGVGFFDVRTKDEAWIRIPVRRGDFVFLPAGIYHRFTTDPSEDVVALRLFRNNPKWT 155

Query: 508 PYNRPA--DEMPCRKDYVEKL 452
            +NR A  DE   R+ Y+  +
Sbjct: 156 AFNRKADGDEQRVRQQYLNDI 176


>U80455-6|AAB37884.1|  159|Caenorhabditis elegans Hypothetical
           protein T01D1.4 protein.
          Length = 159

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
 Frame = -1

Query: 868 EYFKINID-TYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEI 692
           +Y+K+++D T      L  +K E+  T+ D    S+  L  +++K++ FY   +  ++ I
Sbjct: 38  QYYKVDLDDTASMKKRLSAVKTEKNVTFTDMFTVSETML-EFDDKMEQFYEPQVQKEDVI 96

Query: 691 RFILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFF 530
             +++G+ Y+DV   +D WIR+ V KGD++VIP G+ HRFT    N++K +RFF
Sbjct: 97  SLVVEGTCYYDVEPEDDSWIRVQVEKGDLIVIPKGLSHRFTTTPQNFVKIQRFF 150


>U23173-1|AAC46708.1|  221|Caenorhabditis elegans Hypothetical
           protein K07E1.1 protein.
          Length = 221

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -1

Query: 865 YFKIN-IDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIR 689
           Y+K++ +D       L  LK E  +  ED      E   N+++KI+  + E     E+ R
Sbjct: 103 YWKLDTLDQVALAKRLTTLKLEHSFKKEDIFTLDAETTANFDDKIEELFEESSVPFEQAR 162

Query: 688 FILDGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGE 521
            I++G+ Y+DV D   QW+RI    GD+++IP+    RFT   +N++K +RF+  E
Sbjct: 163 MIIEGTAYYDVEDKNGQWVRIFCEYGDLILIPANTCFRFTTTPHNFVKMRRFYKDE 218


>AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical
           protein C16A11.5 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -2

Query: 258 SRPKLAKSVQPFSSFSETNEQQFIFIYIDYRLYIFQINVFVII 130
           S  +LA++V+   +F  ++    I+  +D   YI++ +VF+II
Sbjct: 76  SGKELAENVRIHRNFPTSHRSPIIYKSLDNNQYIYKTDVFIII 118


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 782 IFICVTSFILKFF*YSISFICVYVYFKI 865
           I + +T  I  FF + I+ +C+ VY KI
Sbjct: 30  IIVSITELIFYFFAFYINSVCLKVYLKI 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,384,819
Number of Sequences: 27780
Number of extensions: 467988
Number of successful extensions: 1119
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)