Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e06f
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 476 LPWTPITT*KRNVSSLVSRFGCLTTGRPMRCLAGR 580
           +PW  +         L +  GC T G  ++CL  R
Sbjct: 227 VPWALMEQPLAQTKKLATIVGCGTDGTMIKCLKSR 261


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 476 LPWTPITT*KRNVSSLVSRFGCLTTGRPMRCLAGR 580
           +PW  +         L +  GC T G  ++CL  R
Sbjct: 227 VPWALMEQPLAQTKKLATIVGCGTDGTMIKCLKSR 261


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -2

Query: 306 LIIRKTFLGTDHLIFICVTSFILKFF*YSISFICVYVYFKIFN 178
           LI+R  F+ T  +   C    + +F  Y      + V+F +FN
Sbjct: 492 LIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFN 534


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 279 TDHLIFICVTSFILKFF*YSISFICVYVY 193
           T HL+F CV   +L  + +  +FI   V+
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVH 251


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 413 GSVLPCLRETCWSSRAVSTTGLPWTPITT 499
           GS + C+ E  WS    +    P  P+T+
Sbjct: 107 GSEVSCISEEVWSKLIETGNKPPTLPVTS 135


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/59 (20%), Positives = 27/59 (45%)
 Frame = +1

Query: 58   FVFKMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEK 234
            ++F+ V+    + +    ++ + K   +Y  +   F+K G      +I  Y  +GV E+
Sbjct: 1044 YLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQ 1102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,373
Number of Sequences: 336
Number of extensions: 5314
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)