Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e01f
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    26   1.3  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       24   3.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.8  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 313 RANRQRRNRCASGAKRRIGPSVEDS-EQVLQGRCASSHTA*WRTT 444
           R  R  R +  +  +   GP+++   EQVLQ RC S H   ++ T
Sbjct: 11  RTQRATRKQTTTFDESIPGPAIDRRREQVLQPRCKSVHFVIYKDT 55


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -1

Query: 379 PHWVQCVALLPMH 341
           PH+V+CVA LP++
Sbjct: 53  PHFVKCVASLPIY 65


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 437 EPLHVDPHLIEGHLIYLTQD 496
           EP   DP+LIEG L+Y  ++
Sbjct: 442 EPPVSDPNLIEGGLLYTPEN 461


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 350 EQSDALDPVWRIVNKYYRADVRVHTRLDGEPLHVDPHL 463
           E  D L  VW +V ++ RAD  +      +PL  D  L
Sbjct: 570 ELKDRLPSVWYLVRQFDRADQWMEYTYTKDPLTDDYQL 607


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 350 EQSDALDPVWRIVNKYYRADVRVHTRLDGEPLHVDPHL 463
           E  D L  VW +V ++ RAD  +      +PL  D  L
Sbjct: 571 ELKDRLPSVWYLVRQFDRADQWMEYTYTKDPLTDDYQL 608


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 407 DVRVHTRLDGEPLHV 451
           D+R+     GEPLHV
Sbjct: 9   DIRLRPNFGGEPLHV 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,238
Number of Sequences: 2352
Number of extensions: 10959
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)