Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17e01f
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399515-1|AAK95000.1|  217|Homo sapiens olfactory receptor prot...    31   2.8  
AB065748-1|BAC05968.1|  316|Homo sapiens seven transmembrane hel...    31   2.8  
BC058886-1|AAH58886.1|  315|Homo sapiens hypothetical protein FL...    31   4.9  
BC047026-1|AAH47026.1|  315|Homo sapiens hypothetical protein FL...    31   4.9  
AK021568-1|BAB13845.1|  315|Homo sapiens protein ( Homo sapiens ...    31   4.9  

>AF399515-1|AAK95000.1|  217|Homo sapiens olfactory receptor
           protein.
          Length = 217

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -2

Query: 396 YLFTILHTGSNASLCSRCTSVPSLSIS-SDTM*SAAILF-SALTKSIGKLLNFHMFNYLN 223
           Y+F++ +  SN      C +VP L++S SDT     ++F SA T  +G L+   + +Y N
Sbjct: 95  YVFSVSYCSSNIINHFYCDNVPLLALSCSDTYLPETVVFISAATNVVGSLI-IVLVSYFN 153

Query: 222 LSIN 211
           + ++
Sbjct: 154 IVLS 157


>AB065748-1|BAC05968.1|  316|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -2

Query: 396 YLFTILHTGSNASLCSRCTSVPSLSIS-SDTM*SAAILF-SALTKSIGKLLNFHMFNYLN 223
           Y+F++ +  SN      C +VP L++S SDT     ++F SA T  +G L+   + +Y N
Sbjct: 162 YVFSVSYCSSNIINHFYCDNVPLLALSCSDTYLPETVVFISAATNVVGSLI-IVLVSYFN 220

Query: 222 LSIN 211
           + ++
Sbjct: 221 IVLS 224


>BC058886-1|AAH58886.1|  315|Homo sapiens hypothetical protein
           FLJ11506 protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 266 LLVSAENKIAADYIVSELIDNEGTDVHREQSDALDPV-WRIVNKYYRADVRV 418
           L+ S  +  + D +V  ++  E   V    +DA+    W I NKYY AD+ +
Sbjct: 9   LVTSCSSVFSGDQLVQHILGTEDLIVEVTSNDAVRFYPWTIDNKYYSADINL 60


>BC047026-1|AAH47026.1|  315|Homo sapiens hypothetical protein
           FLJ11506 protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 266 LLVSAENKIAADYIVSELIDNEGTDVHREQSDALDPV-WRIVNKYYRADVRV 418
           L+ S  +  + D +V  ++  E   V    +DA+    W I NKYY AD+ +
Sbjct: 9   LVTSCSSVFSGDQLVQHILGTEDLIVEVTSNDAVRFYPWTIDNKYYSADINL 60


>AK021568-1|BAB13845.1|  315|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11506 fis, clone HEMBA1002151, moderately
           similar to Rattus norvegicus p34 mRNA. ).
          Length = 315

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 266 LLVSAENKIAADYIVSELIDNEGTDVHREQSDALDPV-WRIVNKYYRADVRV 418
           L+ S  +  + D +V  ++  E   V    +DA+    W I NKYY AD+ +
Sbjct: 9   LVTSCSSVFSGDQLVQHILGTEDLIVEVTSNDAVRFYPWTIDNKYYSADINL 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,004,837
Number of Sequences: 237096
Number of extensions: 1522938
Number of successful extensions: 3189
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3189
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)