Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17d22f
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     26   0.34 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.6  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +2

Query: 479 YVDASGQRHWLHMAKLILKQVKDASPILFSFRVKFYPPNPLLLKEDVTRFQIYLQLK 649
           +V  SGQ  WL       ++++D    LF F +KF P  P   +ED+     Y+Q +
Sbjct: 287 FVKNSGQ--WLREYD---RELEDFDGRLFEFPIKFVPSYP--FEEDINEGSNYMQTR 336


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 356 RLLEDTEILECEFHPSFKGKSLLEHVCQQLN 448
           R+LE  + +EC+       ++ + H+C   N
Sbjct: 209 RILEAEKRVECKMEQQGNYENAVSHICNATN 239


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 356 RLLEDTEILECEFHPSFKGKSLLEHVCQQLN 448
           R+LE  + +EC+       ++ + H+C   N
Sbjct: 209 RILEAEKRVECKMEQQGNYENAVSHICNATN 239


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 288 CVINKKSEKCLKAVE 332
           C + K  + CLKA++
Sbjct: 417 CTLEKSQDDCLKAIK 431


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 288 CVINKKSEKCLKAVE 332
           C + K  + CLKA++
Sbjct: 417 CTLEKSQDDCLKAIK 431


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 288 CVINKKSEKCLKAVE 332
           C + K  + CLKA++
Sbjct: 417 CTLEKSQDDCLKAIK 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,478
Number of Sequences: 438
Number of extensions: 3530
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)