Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17d21f
         (751 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   299   3e-81
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   299   3e-81
BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p pro...    31   2.2  
BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p pro...    31   2.2  
AE013599-2057|AAF58137.1|  390|Drosophila melanogaster CG12958-P...    31   2.2  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  299 bits (733), Expect = 3e-81
 Identities = 129/245 (52%), Positives = 172/245 (70%)
 Frame = +3

Query: 12  MKTFLLLGLLGVYCSALSIKQQRRFPDDFLFGTATASYQIEGAWDEDGKGENIWDYMTHN 191
           M+  L L +L   C    + Q RRFP+DFL+G  ++SYQIEG W+ D KGE+IWD++TH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPTVIADESNGDIAADSYHNVERDVEMMRELGLDVYRFSVSWSRILPSGFANEVNEAGVD 371
           +P  I D SNGD++ADSYH  +RDV+M++EL +  YRFS+SW RI+P G+ N V+ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYNITPMISLYHWDLPQKLQELGGFANPLIADWFEDYVRVVFAKLGDRVK 551
           YY+ LI+E+L+YNITPM+++YHW+LPQKLQELGG+ NP I   F+DY R+V    GDRVK
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVK 181

Query: 552 LWITFNEPRVVCYQGYGSTEKAPMLNATAVGTYMCARNLLLAHAKAYRLYNNEFKTKQGG 731
           +W T NEP  VC  GYG    AP  N   +  Y+C  NLL AHA+   +Y   F+ +QGG
Sbjct: 182 IWTTVNEPWHVCEHGYGVDYMAPSYNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241

Query: 732 QCGIT 746
           + GIT
Sbjct: 242 RMGIT 246


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  299 bits (733), Expect = 3e-81
 Identities = 129/245 (52%), Positives = 172/245 (70%)
 Frame = +3

Query: 12  MKTFLLLGLLGVYCSALSIKQQRRFPDDFLFGTATASYQIEGAWDEDGKGENIWDYMTHN 191
           M+  L L +L   C    + Q RRFP+DFL+G  ++SYQIEG W+ D KGE+IWD++TH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPTVIADESNGDIAADSYHNVERDVEMMRELGLDVYRFSVSWSRILPSGFANEVNEAGVD 371
           +P  I D SNGD++ADSYH  +RDV+M++EL +  YRFS+SW RI+P G+ N V+ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYNITPMISLYHWDLPQKLQELGGFANPLIADWFEDYVRVVFAKLGDRVK 551
           YY+ LI+E+L+YNITPM+++YHW+LPQKLQELGG+ NP I   F+DY R+V    GDRVK
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVK 181

Query: 552 LWITFNEPRVVCYQGYGSTEKAPMLNATAVGTYMCARNLLLAHAKAYRLYNNEFKTKQGG 731
           +W T NEP  VC  GYG    AP  N   +  Y+C  NLL AHA+   +Y   F+ +QGG
Sbjct: 182 IWTTVNEPWHVCEHGYGVDYMAPSYNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241

Query: 732 QCGIT 746
           + GIT
Sbjct: 242 RMGIT 246


>BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p
           protein.
          Length = 818

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 366 VDYYNRLINEMLKYNITPMISLYHWD-LPQKLQELGGFANPLIA---DWFEDYVRVVFAK 533
           +D +N  + ++   N   M+  YH D LPQ++QEL    N L+A   D       V+  K
Sbjct: 429 IDAHNAYVQQLHATN--GMLEAYHTDTLPQQMQELEEIHNDLVAIVSDSLMQGAEVIAGK 486

Query: 534 LGDRVK 551
             D+ K
Sbjct: 487 ANDQAK 492


>BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p
           protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 366 VDYYNRLINEMLKYNITPMISLYHWD-LPQKLQELGGFANPLIA---DWFEDYVRVVFAK 533
           +D +N  + ++   N   M+  YH D LPQ++QEL    N L+A   D       V+  K
Sbjct: 204 IDAHNAYVQQLHATN--GMLEAYHTDTLPQQMQELEEIHNDLVAIVSDSLMQGAEVIAGK 261

Query: 534 LGDRVK 551
             D+ K
Sbjct: 262 ANDQAK 267


>AE013599-2057|AAF58137.1|  390|Drosophila melanogaster CG12958-PA
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 366 VDYYNRLINEMLKYNITPMISLYHWD-LPQKLQELGGFANPLIA---DWFEDYVRVVFAK 533
           +D +N  + ++   N   M+  YH D LPQ++QEL    N L+A   D       V+  K
Sbjct: 169 IDAHNAYVQQLHATN--GMLEAYHTDTLPQQMQELEEIHNDLVAIVSDSLMQGAEVIAGK 226

Query: 534 LGDRVK 551
             D+ K
Sbjct: 227 ANDQAK 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,905,596
Number of Sequences: 53049
Number of extensions: 778198
Number of successful extensions: 2296
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)