Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17d15f
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 36 0.004
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 29 0.61
SPBC21C3.17c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.9
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 1.9
SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydro... 27 2.5
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 3.3
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 26 5.7
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 26 5.7
SPBC17G9.02c |||RNA polymerase II accessory factor, Cdc73 family... 25 7.6
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 25 7.6
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 25 10.0
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 25 10.0
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 25 10.0
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 10.0
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 25 10.0
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 36.3 bits (80), Expect = 0.004
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 263 QLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDG 442
++ P I+++ N +++ D +L LD+SNN LRS P
Sbjct: 423 KIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN------LRS-----PRGKP 471
Query: 443 IYREIALETLNLGYNEIHSLDRYLFK--YTPNLTRLYLNNNPIEILDHVSILAISSATNL 616
I LE LN+ N+I+ LD +F +L L + NN + L H + + NL
Sbjct: 472 ITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLV----NL 527
Query: 617 EVLDLSKTDIDSIPL 661
LDLS + + PL
Sbjct: 528 TYLDLSYNNFVTFPL 542
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 428 PYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSA 607
PYE + + L LG+N I S+ + K+T L L + +N + S+ + S
Sbjct: 43 PYEQLERIQGRIARLALGHNFIKSIGPEILKFT-RLRYLNIRSNVLREFPE-SLCRLES- 99
Query: 608 TNLEVLDLSKTDIDSIP 658
LE+LD+S+ I +P
Sbjct: 100 --LEILDISRNKIKQLP 114
>SPBC21C3.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 186
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 351 MFLKASSSISITRFDLKLIAILFPGIGLSCVIFVMLLLKNVTR 223
M + S + S+ D KL L +GLSC I ++L L TR
Sbjct: 126 MVVDVSPAFSVNPIDKKLAIGL--SVGLSCCILIVLFLHFATR 166
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 205 KQRWSRPSDVFQQQHYKYNATESD 276
K +++RPSD ++ ++ YNA SD
Sbjct: 96 KGKFTRPSDEYESEYSDYNAQPSD 119
>SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydroxy-
6-
hydroxymethyldihydropteridinediphosphokinase/dihydroneop
terinaldolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.1 bits (57), Expect = 2.5
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 431 YEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHV---SILAIS 601
YED +Y L +LG E + R L +P+L Y + E LD + I S
Sbjct: 348 YEDCVYESEVLTIPHLGLQEREFVLRPLLALSPDLVHPYTHQPLQEALDKLPSQGIRLYS 407
Query: 602 SATNLEVLDLSKT-DIDSIPLDAF 670
S N ++++ + T I ++ D+F
Sbjct: 408 SFDNKKIINGALTMGILNVTPDSF 431
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 155 RRDIVKIPNWPE----QINNISKDGHVLVTFFNNSITNITQLSPIPGNRIAISFK 307
R D+ + N+ E ++ N+S D H F S+T+ ++ P +R + K
Sbjct: 1073 RNDVAQEDNFIELSSNEVRNVSNDEHKHTLFHGQSLTHNNLIAVTPPSRTGVEHK 1127
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 461 LETLNLGYNEIHSL-DRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNLEVLDLSK 637
L+TL+L N + + D P LT L +NP+ + + I +L +LD +
Sbjct: 89 LKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDNPVAQKQYYRLYLIWRIPSLHILDFER 148
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 167 VKIPNWPEQINNISKDGHVLVTFFNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFR 346
+K NWP ++N SKD V+ N + QL+P +R + ++ V++ + +
Sbjct: 275 LKAANWPRTVSNFSKD----VSDGENYTVLLNQLAPELCSRAPL--QTTDVLQRAEQVLQ 328
Query: 347 NIPRL 361
N +L
Sbjct: 329 NAEKL 333
>SPBC17G9.02c |||RNA polymerase II accessory factor, Cdc73
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 174 ILTMSRREQFSVRLLVSSTDISQGALGASAP-ARFDDTRTIVIVNTAGKYIFLDNSQH 4
+L S E+ V+LL SS S+ A FD+ + ++++ K+I L+N H
Sbjct: 6 LLKKSIAEKKDVKLLASSEATSKVEKIEDAQYILFDENTSPILIDEPTKFIKLENDSH 63
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 354 GMFLKASSSISITRFDLKLIAILFPGIGLSCVI 256
G+F++ ++ +F+ K +A LF I ++C+I
Sbjct: 200 GVFIRVFYLVNKEKFEKKELAFLFSSIVVACLI 232
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 25.0 bits (52), Expect = 10.0
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 236 FNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFR-NIPRLVYLDLSNNKISGQVLRS 412
+ +I +++ S +P + A ++ +D + + RL L+ + N S ++
Sbjct: 24 YTRNIMSVSASSLVPKDFRAFRIGLVQLANTKDKSENLQLARLKVLEAAKNG-SNVIVLP 82
Query: 413 EIFQGPYEDGIYREIA--LETLNLGYNEIHSL 502
EIF PY G + + A +E + Y + S+
Sbjct: 83 EIFNSPYGTGYFNQYAEPIEESSPSYQALSSM 114
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 527 PNLTRLYLNNNPIEILDHVSIL--AISSATNLEVLDLSKTDIDSI 655
PN+ +Y NN P I++ + + AIS E + +S+ S+
Sbjct: 342 PNIETVYYNNEPARIIEFTTAIGSAISQFKKTEGIRVSRPRFISV 386
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 582 TWSSISIGLLFKYNLVKFGVYL-NKYLSNEWI 490
TWSS+ L F L+ GVYL K L NE +
Sbjct: 362 TWSSLFFDLQFLIWLLPVGVYLCFKELRNEHV 393
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 32 FPAVLTITIVLVSSNRAGADAPSAPCDISVEDTSNLTLNCSRRD 163
FP+ + V+ + G D A D +D + LT+N +R++
Sbjct: 498 FPSPDEVKTCFVAHSLQGEDTSMAILDFVAQDKALLTMNVTRQE 541
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 290 IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISG 397
+++ N + EI A +P+L L+L++NKI+G
Sbjct: 359 VSLDLSGNELTEIPY-ALGELPQLCSLNLASNKITG 393
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,732,818
Number of Sequences: 5004
Number of extensions: 55128
Number of successful extensions: 186
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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