Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17d11f
         (421 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical pr...    74   4e-14
U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical pr...    64   3e-11
AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine r...    30   0.58 
Z35637-6|CAA84685.1|  341|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U80029-16|AAB37595.2|  330|Caenorhabditis elegans Serpentine rec...    27   4.1  
AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical ...    27   4.1  
AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine re...    27   4.1  
AF078157-4|AAN84816.1|  365|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AC024796-7|AAN60505.2|  414|Caenorhabditis elegans Hypothetical ...    26   9.5  
AC024214-16|ABA00187.1|  343|Caenorhabditis elegans Hypothetical...    26   9.5  

>Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical
           protein M153.1 protein.
          Length = 279

 Score = 74.1 bits (174), Expect = 4e-14
 Identities = 34/62 (54%), Positives = 48/62 (77%)
 Frame = -1

Query: 190 IYIVIEALADGAVKQGVPRAMALRHAAQVVVGSGQMVLQTGKHPGLLKDEVCSPAGSTIC 11
           ++ VIE LADG VK G+PR +AL+ AA  ++G+ +MVL+TG HP  LKD+V SPAGS++ 
Sbjct: 178 MFAVIEGLADGGVKVGLPRDLALKLAAYTLLGAAKMVLETGIHPAQLKDDVQSPAGSSVY 237

Query: 10  GV 5
           G+
Sbjct: 238 GM 239


>U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical
           protein F55G1.9 protein.
          Length = 299

 Score = 64.5 bits (150), Expect = 3e-11
 Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
 Frame = -1

Query: 187 YIVIEALADGAVKQGVPRAMALRHAAQVVVGSGQMVLQTG-------KHPGLLKDEVCSP 29
           ++ IE+LADGAV QG+ RA A R AAQ V+G+ QMVL +        +H G LKD VCSP
Sbjct: 200 FMYIESLADGAVAQGLGRAEAKRLAAQAVLGAAQMVLNSNSGFDIETQHFGSLKDMVCSP 259

Query: 28  AGSTICGV 5
            G+TI GV
Sbjct: 260 GGTTIEGV 267


>AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine
           receptor, class z protein78 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 0.58
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 305 ALFTFLRPFVYMFTFLLNFYIFIHNFFVYNKIILKVKKK 421
           A  T +R  V +F FL+  Y+ I+ F+VYN  + + K K
Sbjct: 16  ATLTAVRGLVAIFYFLMLLYLVIYPFYVYNFKLNRRKDK 54


>Z35637-6|CAA84685.1|  341|Caenorhabditis elegans Hypothetical
           protein C03C10.1 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 193 ETFEYSYLKIAVFFLFRGFKHNYDYT 270
           E+ +Y YL+     LFR   H YDYT
Sbjct: 269 ESPDYMYLRQLFRILFRTLNHQYDYT 294


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +1

Query: 151 SQHHRLRLLSQYKSETFEYSYLKIAVFFLFRGFKHNYD--YTCFFFLSQKFVICSVYIFT 324
           S H+ ++ L   +S+    S          R F H++D   TCF F+  K   CS+  F 
Sbjct: 14  SHHNSMKSLRSVRSQKSMRSLKSQKSTQSIRIFNHHHDTYQTCFGFMHVKIATCSIGFFA 73

Query: 325 TI 330
            +
Sbjct: 74  LL 75


>U80029-16|AAB37595.2|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 21 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 313 YIFTTICLHVHIFIKFLHFYSQLL 384
           +I  TI   VH+F  F+HF+S+++
Sbjct: 55  HINVTIIFQVHLFGFFIHFFSRII 78


>AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical
           protein W09B6.5 protein.
          Length = 270

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 230 FFYSEASNTIMITLVFFFLAKNL*YALFTFLRPFVYMFTFLLNFYIF 370
           F  +   N + I    FFLAKN  + +F F     Y+ T +  F  F
Sbjct: 214 FRENRKKNCLKIFQKKFFLAKNFYFQIFNFFIANQYLITLIYTFSHF 260


>AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 60 protein.
          Length = 289

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 344 TFLLNFYIFIHNFFVYNKI 400
           TFLLNFYIF+   F++ KI
Sbjct: 20  TFLLNFYIFL-AIFIFKKI 37


>AF078157-4|AAN84816.1|  365|Caenorhabditis elegans Hypothetical
           protein F25E5.16 protein.
          Length = 365

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 197 VSDLYCDRSLSRWCCEAR 144
           + D+YC  S+  W C+AR
Sbjct: 63  IVDIYCHSSIPSWSCDAR 80


>Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical
           protein R102.6 protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 274 FFFLSQKFVICSVYIFTTICLHVHIFIKFL 363
           + FL   F +C ++IF  I   +H+F+ FL
Sbjct: 115 YIFLIPYFTVCVLFIFVLI---LHLFVDFL 141


>AC024796-7|AAN60505.2|  414|Caenorhabditis elegans Hypothetical
           protein Y48G1C.11 protein.
          Length = 414

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 19  WNQQENKLHLSIDQDVYRFARPSDRYPLPPVLRDAMPL 132
           WN  E K+HL + ++ Y  A P   Y +P + R  M L
Sbjct: 220 WNSSEWKMHLDLPEE-YSSAYP---YSIPEISRPIMDL 253


>AC024214-16|ABA00187.1|  343|Caenorhabditis elegans Hypothetical
           protein Y77E11A.16 protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 308 LFTFLRPFVYMFTFLLNFYIFIHNFFVYNK 397
           L T + P   ++  ++ FY  +HN+ ++NK
Sbjct: 201 LATIVLPMFPIYCMVIFFYKKVHNYLIHNK 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,665,313
Number of Sequences: 27780
Number of extensions: 204635
Number of successful extensions: 670
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)