Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17d10r
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 56 4e-09
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 39 0.001
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 28 1.8
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 27 3.1
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 26 7.2
SPAC5D6.13 ||SPAPJ735.02c|Golgi phosphoprotein 3 family|Schizosa... 26 7.2
SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 7.2
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 9.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 9.5
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 25 9.5
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 56.4 bits (130), Expect = 4e-09
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -3
Query: 795 YNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKLMR 616
Y+++YTERYM LP + N GY+ + F++ HG DDNVH+Q++ LM
Sbjct: 678 YDSVYTERYMDLP--QYNKEGYKNSQIHDYEKFKQLKRFFVAHGTGDDNVHFQHSMHLMD 735
Query: 615 ALQEKD-IPFEQMSYPDEAHSLA 550
L + ++ +PD AHS++
Sbjct: 736 GLNLANCYNYDMAVFPDSAHSIS 758
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 798 YYNTMYTERYMGLPTPEDN-LSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKL 622
YY+ Y+E +G + + + A + KL G ++HG +DDNVH +N +L
Sbjct: 749 YYDAYYSENLLGAYSKQTTAIYDKTAVHYSENFRKLCG--LLVLHGTSDDNVHIENTMQL 806
Query: 621 MRALQEKDI 595
+A+ EK +
Sbjct: 807 TKAMVEKGV 815
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 669 HGNADDNVHYQNAAKLMRALQEKDIPFEQMSY 574
H NA NV + AKL+ L ++I F+++ Y
Sbjct: 965 HRNARKNVFIRKVAKLLMILNAEEIDFKRLFY 996
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/83 (28%), Positives = 33/83 (39%)
Frame = -3
Query: 792 NTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKLMRA 613
N Y P+PE + + + VD+LAG F + G + HY A K +
Sbjct: 67 NQSYVPSSSNEPSPESSSNSDSSSSDDSSVDRLAGDPFEL--GENFNLKHYLRAYK--DS 122
Query: 612 LQEKDIPFEQMSYPDEAHSLAGV 544
LQ DI HS+ GV
Sbjct: 123 LQRDDIITRSSGVCMRDHSVYGV 145
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 790 YNVHGTLHGTSDSRRQFV 737
+ +GTL+G SDSR+Q V
Sbjct: 609 FRTNGTLYGLSDSRKQAV 626
>SPAC5D6.13 ||SPAPJ735.02c|Golgi phosphoprotein 3
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 663 NADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGVNM 538
NA DN++Y++ K + E F Q + A S G N+
Sbjct: 260 NALDNLNYEDREKAFSRVDELLCDFSQWPFDLHASSSVGANL 301
>SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 100
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 297 CTRLLLELPLKHSFVNLN 244
C R L LKH++VNLN
Sbjct: 57 CQRFLFSSNLKHNYVNLN 74
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 333 LWSFYSAYNYIIVKLRHFSSSTDVTKP*MSLLKMQNSVF*LLFYKLF*NETTTYANTYSS 512
+W Y+ N SSS V P S L ++N ++ Y L E+ Y++ S
Sbjct: 631 IWILYTNQNRTTTLDYQCSSSNSVVSPYASGLTLKNLIYPFEEYIL--QESNKYSSNLKS 688
Query: 513 IYP*RCTDAYSLPP 554
Y C PP
Sbjct: 689 YY--GCIPNIEFPP 700
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 354 MLSRTTTVLVRFGIRNMPNCTRLLLELPLKHSFVN 250
+ + TT ++ F I N P C ++ E L H+F++
Sbjct: 545 LFASTTNIMSTF-IHNEPTCYGIIHEKKLSHAFLD 578
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2
Query: 191 SVLFLTNYFTLKTLL 235
SV FLTNYF LK LL
Sbjct: 980 SVPFLTNYFELKFLL 994
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,192,062
Number of Sequences: 5004
Number of extensions: 64523
Number of successful extensions: 130
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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