Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17d10r
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69883-1|CAA93743.1| 829|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical pr... 78 8e-15
Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical pr... 78 8e-15
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 52 6e-07
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 52 6e-07
L23648-15|AAM48526.1| 511|Caenorhabditis elegans Dipeptidyl pep... 35 0.078
L23648-13|AAM48525.1| 740|Caenorhabditis elegans Dipeptidyl pep... 35 0.078
U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine rece... 30 2.2
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70781-2|CAA94832.1| 396|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z69883-1|CAA93743.1| 829|Caenorhabditis elegans Hypothetical protein
C27C12.7 protein.
Length = 829
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = -3
Query: 798 YYNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKLM 619
YY++ YTERY+G P +NL GY +V + + + HG DDNVHYQN+A+
Sbjct: 723 YYDSAYTERYLGQPA--ENLQGYINTNVIPHARNVTNVKYLLAHGERDDNVHYQNSARWS 780
Query: 618 RALQEKDIPFEQMSYPDEAHSLAGVNMHRYNAMDRY-WNRCLR 493
ALQ+ I F Q+ Y +EAHSL+ H Y + R+ N C +
Sbjct: 781 EALQQNGIHFTQLVYANEAHSLSHKLFHLYGEVQRFLMNDCFK 823
>Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical
protein T23F1.7b protein.
Length = 799
Score = 77.8 bits (183), Expect = 8e-15
Identities = 40/100 (40%), Positives = 55/100 (55%)
Frame = -3
Query: 798 YYNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKLM 619
YY+ YTERYMG + L Y DVT +D +MHG DDNVH+QN+A L+
Sbjct: 701 YYDATYTERYMG----DAPLESYS--DVTKKLDNFKSTRLLLMHGLLDDNVHFQNSAILI 754
Query: 618 RALQEKDIPFEQMSYPDEAHSLAGVNMHRYNAMDRYWNRC 499
LQ + + F+ M YP++AHSL+ H M + +C
Sbjct: 755 DELQNRGVDFDLMVYPNQAHSLSSRTSHVVGKMTHFLRQC 794
>Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical
protein T23F1.7a protein.
Length = 779
Score = 77.8 bits (183), Expect = 8e-15
Identities = 40/100 (40%), Positives = 55/100 (55%)
Frame = -3
Query: 798 YYNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAGHDFYIMHGNADDNVHYQNAAKLM 619
YY+ YTERYMG + L Y DVT +D +MHG DDNVH+QN+A L+
Sbjct: 681 YYDATYTERYMG----DAPLESYS--DVTKKLDNFKSTRLLLMHGLLDDNVHFQNSAILI 734
Query: 618 RALQEKDIPFEQMSYPDEAHSLAGVNMHRYNAMDRYWNRC 499
LQ + + F+ M YP++AHSL+ H M + +C
Sbjct: 735 DELQNRGVDFDLMVYPNQAHSLSSRTSHVVGKMTHFLRQC 774
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -3
Query: 795 YNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAG--HDFYIMHGNADDNVHYQNAAKL 622
Y+T YTERYMG P E Y A +T LV+KL + ++HG D+NVH+ + L
Sbjct: 812 YDTAYTERYMGYPLEE---HVYGASSITGLVEKLPDEPNRLMLVHGLMDENVHFAHLTHL 868
Query: 621 MRALQEKDIPFEQMSYPDEAHSL 553
+ +K E + +P+E H +
Sbjct: 869 VDECIKKGKWHELVIFPNERHGV 891
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -3
Query: 795 YNTMYTERYMGLPTPEDNLSGYEAGDVTLLVDKLAG--HDFYIMHGNADDNVHYQNAAKL 622
Y+T YTERYMG P E Y A +T LV+KL + ++HG D+NVH+ + L
Sbjct: 816 YDTAYTERYMGYPLEE---HVYGASSITGLVEKLPDEPNRLMLVHGLMDENVHFAHLTHL 872
Query: 621 MRALQEKDIPFEQMSYPDEAHSL 553
+ +K E + +P+E H +
Sbjct: 873 VDECIKKGKWHELVIFPNERHGV 895
>L23648-15|AAM48526.1| 511|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 6, isoform b protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 675 IMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGV--NMHRYNAMDRYWNR 502
I+ G D V + + + AL++K IP + YPDE H + +M ++ ++ + +
Sbjct: 369 IIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQNSMEQHGHIETFLQQ 428
Query: 501 CL 496
CL
Sbjct: 429 CL 430
>L23648-13|AAM48525.1| 740|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 6, isoform a protein.
Length = 740
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 675 IMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGV--NMHRYNAMDRYWNR 502
I+ G D V + + + AL++K IP + YPDE H + +M ++ ++ + +
Sbjct: 598 IIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQNSMEQHGHIETFLQQ 657
Query: 501 CL 496
CL
Sbjct: 658 CL 659
>U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 25 protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 18 YTTECNSTSIINY*FTYR*GSKIISRSNV*RT--KNIHNSTVKIPLHELILHKHLFIHIV 191
+ T C +++ Y F + SK + +V +T KN+ N VK+ +LIL +F+ I
Sbjct: 183 FITAC--LAVVAYTFIRKSLSKFARKMSVIKTNEKNLRNRLVKVATFKLILPSFIFLGIT 240
Query: 192 VY 197
V+
Sbjct: 241 VF 242
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 725 PVTSRS*LTNWPVMTSTSCTETPTIMCTIKT 633
P TS S T T+T+ TE PT TIKT
Sbjct: 207 PSTSTSTTTTTTTSTTTTTTEAPTTTTTIKT 237
>Z70781-2|CAA94832.1| 396|Caenorhabditis elegans Hypothetical
protein F57A8.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -1
Query: 794 IIQCTRNATWDFRLQKTICLDTKPVTSRS*LTNW---PVMTSTSCTETPTI 651
+ +C+RN T+DF I P+ + NW + T + T++P +
Sbjct: 16 VAECSRNETYDFNRYALIVYVGTPIAVAGVICNWILFRLFTKSKSTKSPAL 66
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -3
Query: 447 KRYFAFSINSFMV*LHLWMMRNVLISL*CNYMLSRTTTVLVRFGIRNMPNCTRLLLELPL 268
K + + +F + + +MRN +IS+ C Y + TV+ I P +L L
Sbjct: 125 KNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIG--PGLGIFILPRTL 182
Query: 267 KHSFVNLN 244
K V N
Sbjct: 183 KFIMVKYN 190
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -3
Query: 447 KRYFAFSINSFMV*LHLWMMRNVLISL*CNYMLSRTTTVLVRFGIRNMPNCTRLLLELPL 268
K + + +F + + +MRN +IS+ C Y + TV+ I P +L L
Sbjct: 125 KNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIG--PGLGIFILPRTL 182
Query: 267 KHSFVNLN 244
K V N
Sbjct: 183 KFIMVKYN 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,610,992
Number of Sequences: 27780
Number of extensions: 364699
Number of successful extensions: 739
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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