Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17c24r
(920 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.55
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 25 0.97
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.97
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.97
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 2.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 5.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.8
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 9.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 9.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 9.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 9.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 9.0
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.55
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 568 SYKQNLNIYVRSEDFDNFRHYWHLCYK----LQLSHNTILVNLL 687
S+K+ +N Y ++D + F +Y K + + NT+ +N+L
Sbjct: 301 SFKRKVNFYPNNQDIEKFLNYLKRGGKTLTSISVESNTMFINIL 344
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 529 SMHSTLDSIYYQISYKQNLNIY 594
S ++ +SI + S K+NLN+Y
Sbjct: 625 SSKNSENSIMQRASMKENLNVY 646
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 25.0 bits (52), Expect = 0.97
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 616 NFRHYWHLCYKLQLSHNTILV 678
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 0.97
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 616 NFRHYWHLCYKLQLSHNTILV 678
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.97
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 616 NFRHYWHLCYKLQLSHNTILV 678
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 712 ND*SKFNINT*IIHHSNKYIKHL*HRTY*YTLVKICLIHNVVYYLNF 852
N+ K+N N +++N Y K L ++ Y + +I + VYY NF
Sbjct: 93 NNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQI-PVPVPVYYGNF 138
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 636 VPVMSEIIEILGTYIYI*ILFVGNLVVNRI 547
+P S+ + +LGTY + V + VV+ I
Sbjct: 284 MPATSDAVPLLGTYFNCIMFMVASSVVSTI 313
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 5.2
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +1
Query: 550 SIYYQISYKQNLNIYVRSEDFDNFRHYWHLCYKLQLSHNTILVNLLHI 693
+++Y+ S ++ Y + + RH++H +++L IL + +H+
Sbjct: 130 TLHYR-SKRRGFVYYTMGQIREVARHFYHKELQIELVREEILFDTVHV 176
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 6.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 244 CINPYTFDNFKLW 282
C+NPY D+ W
Sbjct: 110 CVNPYDRDSLSCW 122
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 174 KLHFNVGIVNIALSCKSNTLKMFLYK 251
K+H N+ ++ S KS T +YK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYK 30
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -3
Query: 357 FHKGTANTSQYFPK--KLFVD 301
FH+ T+NT Y PK K+ +D
Sbjct: 223 FHRLTSNTFDYDPKFTKMTID 243
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -3
Query: 357 FHKGTANTSQYFPK--KLFVD 301
FH+ T+NT Y PK K+ +D
Sbjct: 223 FHRLTSNTFDYDPKFTKMTID 243
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 174 KLHFNVGIVNIALSCKSNTLKMFLYK 251
K+H N+ ++ S KS T +YK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYK 30
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -3
Query: 357 FHKGTANTSQYFPK--KLFVD 301
FH+ T+NT Y PK K+ +D
Sbjct: 223 FHRLTSNTFDYDPKFTKMTID 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,387
Number of Sequences: 438
Number of extensions: 5202
Number of successful extensions: 28
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -