Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17c21r
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 282 3e-76
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 219 3e-57
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 172 4e-43
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 163 2e-40
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 123 2e-28
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.39
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.39
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 2.1
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 2.1
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 2.1
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 2.1
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 2.8
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 4.8
Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 8.4
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 8.4
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 282 bits (691), Expect = 3e-76
Identities = 130/236 (55%), Positives = 173/236 (73%)
Frame = -3
Query: 875 HMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFA 696
HMGNC E T+K++ ITR+DQDEYA+NSYK+SA A+E E+VPV V K+G ++
Sbjct: 174 HMGNCGEKTSKEMGITRKDQDEYAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-D 232
Query: 695 EDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIAR 516
+DEE+ +VNF+KFT L TVFQK+ GT+TA NASTLNDG ++KP+AR
Sbjct: 233 KDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTLNDGAAAVIVASQEAVSEQSLKPLAR 291
Query: 515 IVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDP 336
I+ + D P+DF +AP + PK+LE+ GV++ DVA WE+NEAFS V +A K LG+DP
Sbjct: 292 ILAYGDAATHPLDFAVAPTLMFPKILERAGVKQSDVAQWEVNEAFSCVPLAFIKKLGVDP 351
Query: 335 SKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 168
S +N HGGAVS+GHPIGMSGAR++ HL H LK G+ GVA+ICNGGGG+S ++I+K+
Sbjct: 352 SLVNPHGGAVSIGHPIGMSGARLITHLVHTLKSGQIGVAAICNGGGGSSGMVIQKL 407
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 219 bits (534), Expect = 3e-57
Identities = 109/236 (46%), Positives = 158/236 (66%), Gaps = 1/236 (0%)
Frame = -3
Query: 872 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 693
MG CAE T K ITR++QD YA+ SYK+++ A+ ++ F +E+VPV V R + V+ E
Sbjct: 157 MGLCAEKTVKDYGITREEQDAYAIESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITE 215
Query: 692 DEEYKRVNFEKFTKLSTVFQKEN-GTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIAR 516
DEEYK++ K + L VF ++ GT+T NAS+LNDG + P+A
Sbjct: 216 DEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDGAVATVVVGENALPQ-GAHPLAE 274
Query: 515 IVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDP 336
+V FA+ PIDF +AP A+ LL+K+G++ D+ALWE+NEAF+V +A K L ++P
Sbjct: 275 LVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELNEAFAVTVLAFIKELNIEP 334
Query: 335 SKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 168
S +NV GGAV++GHP+GMSG RIV L ++L G+ GVA+ICNGGG A++V+I+K+
Sbjct: 335 SVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAVLIKKL 390
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 172 bits (418), Expect = 4e-43
Identities = 91/237 (38%), Positives = 140/237 (59%), Gaps = 2/237 (0%)
Frame = -3
Query: 872 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 693
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G F
Sbjct: 160 MGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEES-FEI 218
Query: 692 DEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARI 513
DE + E KL VFQK+ G V AGNAS ++DG K N+KP+AR+
Sbjct: 219 DEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISDGAAALVVAGEDSVKSKNLKPLARV 277
Query: 512 VGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPS 333
V ++ CDP I PA AI ++L+K+G++ D+ ++E+NEAF+ A+A Q+ LG+
Sbjct: 278 VAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIGDIDIFEVNEAFAPQALAVQRELGIPME 337
Query: 332 KINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 168
K+NV+GGA++LGHP+ SGARI H+ H L + + G+ S C GGG +++ EK+
Sbjct: 338 KLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 163 bits (395), Expect = 2e-40
Identities = 78/194 (40%), Positives = 118/194 (60%)
Frame = -3
Query: 749 ELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXX 570
E+V V V K+G + +D+ K ++ + S++ GT++ + + DG
Sbjct: 268 EVVAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTISDKHIAAFTDGAAAV 326
Query: 569 XXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEIN 390
N+KP+ARI+ + D +DF +AP + P LL+ GV + DVA WE+N
Sbjct: 327 ILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVN 386
Query: 389 EAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASIC 210
EAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C
Sbjct: 387 EAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALC 446
Query: 209 NGGGGASSVMIEKM 168
+G GG+S ++I+K+
Sbjct: 447 DGDGGSSGMVIQKL 460
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 123 bits (297), Expect = 2e-28
Identities = 85/258 (32%), Positives = 128/258 (49%), Gaps = 20/258 (7%)
Frame = -3
Query: 887 TTNFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP 708
+T MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P
Sbjct: 190 STGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--P 246
Query: 707 VIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVK 528
ED + EK + L F K +GTVTA NAS L DG A K
Sbjct: 247 KTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYK 306
Query: 527 PIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKL 351
P A + + DP D ++PA IPKLL+K G+ +DV ++EI+EAF+ +AN
Sbjct: 307 PKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNA 366
Query: 350 LGLD-----------------PSKINVHGGAVSLGHPIGMSGARIVVHLCHALK--KGEK 228
+ D K+N+ GG++S+GHP G +G R+ H H LK KG+
Sbjct: 367 MDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQY 426
Query: 227 GVASICNGGGGASSVMIE 174
V + C GG ++IE
Sbjct: 427 AVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 329 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 207
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 329 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 207
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 160 STYIFSIITDDAPPPPLQIEATPFSPFFK 246
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 160 STYIFSIITDDAPPPPLQIEATPFSPFFK 246
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 160 STYIFSIITDDAPPPPLQIEATPFSPFFK 246
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 160 STYIFSIITDDAPPPPLQIEATPFSPFFK 246
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 160 STYIFSIITDDAPPPPLQIEATPFSPFFK 246
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 353 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 174
+LGL + +V V+L + + G VH+ A + KG + G GG+ S +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407
Query: 173 K 171
K
Sbjct: 408 K 408
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 827 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 648
R++ A +R AA A A P P P K PV+F+++ + + TK
Sbjct: 15 REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73
Query: 647 STV 639
ST+
Sbjct: 74 STI 76
>Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical
protein K05D4.8 protein.
Length = 320
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 678 FILFIFSKYYRSPSFLWNGYWY 743
F+L I SK+ P FL+NG W+
Sbjct: 230 FLLIIASKFIYIPIFLFNGDWF 251
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 324 CTWWSCQFGSSNWYVWSSHC 265
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 767 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 612
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 324 CTWWSCQFGSSNWYVWSSHC 265
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 324 CTWWSCQFGSSNWYVWSSHCCTSV 253
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,144,981
Number of Sequences: 27780
Number of extensions: 414324
Number of successful extensions: 1327
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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