Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c19r
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.57 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.4  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 413 NQLGQYQLYLVSLIADANTRSPPNKTPICLSEDTFCPQCRYRNT 544
           N   QYQ Y + L     + +  + TP   SE +F     Y NT
Sbjct: 179 NSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNT 222


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 438 YNWYCPN*FTGSLRIIYLG 382
           Y  YCP   +GS+R+ +LG
Sbjct: 667 YEDYCPTSNSGSVRMSHLG 685


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 656 GIRSCARNRRLECSIGC 706
           GIR C  +R+L  S GC
Sbjct: 70  GIRPCVISRQLRVSHGC 86


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 700  WV*PSLRIKFRIIMAISYVSNPGRVGASENTKPGKLGA 813
            WV P L     +I     +  P      ENTK  K+ A
Sbjct: 1121 WVSPPLTAANGVIKGYKVIYGPSDTWFDENTKDTKITA 1158


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 487 NSNLSFRGYILSSMPLPKYEGHNNPP 564
           NSN+   GY   +   P+   H+ PP
Sbjct: 71  NSNVLSNGYGYGNYYHPQLHSHHGPP 96


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 487 NSNLSFRGYILSSMPLPKYEGHNNPP 564
           NSN+   GY   +   P+   H+ PP
Sbjct: 71  NSNVLSNGYGYGNYYHPQLHSHHGPP 96


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 470 RSPPNKTPICLSEDTFCPQ 526
           R+PP    +C+  D FC +
Sbjct: 159 RAPPCDPAVCVLPDCFCSE 177


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 278 NITLCCPVTCQNRNTC 325
           N+  C P  CQN  TC
Sbjct: 222 NVDDCKPNPCQNGGTC 237



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 278 NITLCCPVTCQNRNTC 325
           N+  C P  C N  TC
Sbjct: 260 NVDDCRPGACHNNGTC 275


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 487 NSNLSFRGYILSSMPLPKYEGHNNPP 564
           NSN+   GY   +   P+   H+ PP
Sbjct: 71  NSNVLSNGYGYGNYYHPQLHSHHGPP 96


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 487 NSNLSFRGYILSSMPLPKYEGHNNPP 564
           NSN+   GY   +   P+   H+ PP
Sbjct: 71  NSNVLSNGYGYGNYYHPQLHSHHGPP 96


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 566 GAKSIKTIWMC*LGNSC 616
           G   I T+W+C L N C
Sbjct: 728 GLVYIATVWICTLMNRC 744


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 392 YILDRFMIFTNHTNKFEDEGGIDKYYDFDKLLDNIMLYW 276
           Y++D   +F +  ++ ED   +   Y F+        YW
Sbjct: 292 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYW 330


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 392 YILDRFMIFTNHTNKFEDEGGIDKYYDFDKLLDNIMLYW 276
           Y++D   +F +  ++ ED   +   Y F+        YW
Sbjct: 248 YVIDTMYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYW 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,294
Number of Sequences: 336
Number of extensions: 5316
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)