Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17c19r
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC869.11 ||SPAC922.08c|amino acid permease, unknown 6|Schizosa... 31 0.21
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 30 0.36
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 29 1.1
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 28 1.9
SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter Zhf1|Schizosacc... 27 2.6
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 27 3.4
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 26 5.9
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.9
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 26 5.9
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 7.8
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 26 7.8
>SPAC869.11 ||SPAC922.08c|amino acid permease, unknown
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 466 YPVSSK*NSNLSFRGYILSSMPLPKYEGHNNPPRSQV-NKDNLDVLAG 606
+P+ K N+N F+GY+ + + L + G+ RS + + D LD+ G
Sbjct: 503 FPIGGKPNANDFFQGYLAAPVTLAFFIGYKIYDRSHIPSLDKLDITTG 550
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 30.3 bits (65), Expect = 0.36
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 466 YPVSSK*NSNLSFRGYILSSMPLPKYEGHNNPPRSQV-NKDNLDVLAGKFVWKPSTSEGK 642
+P+ SK N+N F+GY+ + + + + G+ RS + + LD+ G + P E +
Sbjct: 507 FPIGSKPNANDFFQGYLAAPIVIAFFIGYKIYDRSHIPSLSKLDLDTGLRTYPPKDKESE 566
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 466 YPVSSK*NSNLSFRGYILSSMPLPKYEGHNNPPRSQV-NKDNLDVLAG 606
+P+ N+N F+GY+ + + L + G+ RS + + D LD+ G
Sbjct: 503 FPIGGSPNANDFFQGYLAACITLVFFIGYKIYDRSHIPSLDKLDITTG 550
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 605 GNSCGSQVLLRGRSWRYGIRSCARNRRL 688
G CG ++ G S G+R C R+ R+
Sbjct: 77 GRICGVSIMRAGESMEQGLRECCRSVRI 104
>SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter
Zhf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 272 SGSITTSLRIYKETFAGSRLNNLAQVPTSVPTWALRLKYELFQHPDYMLRWKYTNLLGS 96
+G SL + ++F LN++ V V WA RL + P Y W+ +LG+
Sbjct: 27 TGYAIDSLALIADSF--HMLNDI--VSLLVALWATRLAHSTSHEPKYTYGWQRAEILGA 81
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 152 ARISNEAPMLELKLGPEPDYSTSNLR 229
AR+ +EAP+ E KLGP+ + S R
Sbjct: 91 ARLPHEAPIKEAKLGPDTNIRPSEPR 116
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 77 GHFAAFERPKDFSDDV 30
GH+ FE+PK+FS+ +
Sbjct: 249 GHWVHFEKPKEFSESI 264
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 712 SATPNTTFKAAISGT*SDPISPRSSPQKYLASTRISQLT 596
SATP+TT ++ S + S S +SS +S+R S T
Sbjct: 138 SATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRT 176
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -1
Query: 326 DKYYDFDKLLDNIM-LYWASGSITTSL-RIYKETFAGSRLNNLAQVPTSVPTWALRLKYE 153
D+YY + + +DN++ L + T+L R+Y L L ++ W LR++
Sbjct: 619 DRYYMYKQDIDNVVGLKDFKVYLKTTLNRLYNSKLTRKVLYYLFSPLFTLELWKLRVRGA 678
Query: 152 LFQHPDYMLRWKYTN 108
L + P LR Y++
Sbjct: 679 LSKFPTNCLRSVYSH 693
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 514 ILSSMPLPKYEGHNNPPRSQVNKDNLD-VLAGKFVWKPSTSEGKIVAIW 657
IL LP H P SQ+ KD LD + G+ +W E KI+ W
Sbjct: 2 ILEDTDLPL--SHEQPSYSQI-KDVLDKIPTGEHLWDLPKYEEKIILNW 47
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 701 QYYIQGGDFGHMIGSHIATIFPSEVLGFHTNFPA 600
+ YI+ MIG H+ ++ V+ F TN+ A
Sbjct: 400 EIYIRSITHAIMIGDHVMVMYKGPVITFITNYGA 433
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,872,716
Number of Sequences: 5004
Number of extensions: 87707
Number of successful extensions: 249
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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