Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c19f
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI++L++LS+  I +  W P
Sbjct: 465 WIWLLWLLSQTWITLHIWTP 484


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI++L++LS+  I +  W P
Sbjct: 465 WIWLLWLLSQTWITLHIWTP 484


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI++L++LS+  I +  W P
Sbjct: 465 WIWLLWLLSQTWITLHIWTP 484


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI++L++LS+  I +  W P
Sbjct: 465 WIWLLWLLSQTWITLHIWTP 484


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 394 EALYLPLHETVVFKKRP 344
           + L+ P+H+TV++   P
Sbjct: 40  DKLHHPIHQTVIYHNNP 56


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 167 VVKALFTIYGIYLVYVSLTNVPDLPKVDVNLR 262
           + K  F ++G  L YVS      L ++D  L+
Sbjct: 2   IFKIHFLVFGALLTYVSSVEYLILREIDTILK 33


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI+++++LS+  I +  W P
Sbjct: 219 WIWLVWLLSQAWISVHIWSP 238


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI+++++LS+  I +  W P
Sbjct: 452 WIWLVWLLSQAWISVHIWSP 471


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 534 WIYILFVLSRKLIKMLRWYP 593
           WI+++++LS+  I +  W P
Sbjct: 452 WIWLVWLLSQAWISVHIWSP 471


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 273 STPHRRLTSTLGKSGTFVSD 214
           STP + LTS + +   FV D
Sbjct: 603 STPFKELTSNVFRMNQFVYD 622


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,421
Number of Sequences: 336
Number of extensions: 3323
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)