Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c19f
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        24   5.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.4  

>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -3

Query: 403 RVFEALYLPLHETVVFKKRPDFRFHRVTKYHPVGPYSGVVRVIIDAP 263
           R+   LY    E V FK+RPD   + + ++        +  +++D P
Sbjct: 201 RLARDLYQAQIEQVNFKERPDLARNTINRWVNESTRGRIGEILLDDP 247


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 578 HFYQLSA*HEQNVYPNPE 525
           H+YQ S  H Q + P P+
Sbjct: 198 HYYQPSPSHPQPIVPQPQ 215


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 578 HFYQLSA*HEQNVYPNPE 525
           H+YQ S  H Q + P P+
Sbjct: 198 HYYQPSPSHPQPIVPQPQ 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,614
Number of Sequences: 2352
Number of extensions: 12564
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)