Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17c11r
(915 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 74 2e-15
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.9
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 3.9
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 5.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 5.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.8
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 74.1 bits (174), Expect = 2e-15
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Frame = -2
Query: 743 TRIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGASLVTTNRLLTAAHCWFD-GTNQX 567
+RIVGG+ + +FP G+ T +P +CGA++++ +LTAAHC D T +
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTY----EPGM-ICGATIISKRYVLTAAHCIIDENTTKL 213
Query: 566 XXXXXXXXXXXLFSGGTRV--ETSSIVMHPNWSPATIR----NDVAVIYLPSPVTLSDTI 405
V + +++HP + ND+A++ + D +
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273
Query: 404 NTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFV 225
LP Q ++F GS G+G TS +G + + +L L+++ C + +
Sbjct: 274 GPACLPF-QHFLDSFAGSDVTVLGWGHTSFNGML--SHILQKTTLNMLTQVECYKYYGNI 330
Query: 224 LQSSNLCTSGRGGVGTCRGDSGGPLV--VTRNNRPILIGITSFGSGLGCQVNLPAAYARV 51
+ ++ +C + G C+ DSGGP++ R R + IGI S+G+ G P +V
Sbjct: 331 MVNA-MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECG---KYPNGNTKV 385
Query: 50 TSFMNF 33
S++++
Sbjct: 386 GSYIDW 391
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 181 PTPPRPLVHKFEDCKTKGKANVQ 249
P PP PL + ED G+A ++
Sbjct: 440 PLPPLPLHTECEDLSVSGEAGIE 462
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 181 PTPPRPLVHKFEDCKTKGKANVQ 249
P PP PL + ED G+A ++
Sbjct: 440 PLPPLPLHTECEDLSVSGEAGIE 462
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 812 YLTKYGVPEAERIRKAEEAGLSN 744
YLTK+ VPE E+ GL++
Sbjct: 208 YLTKHNVPEQRLNYFTEDVGLNH 230
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 812 YLTKYGVPEAERIRKAEEAGLSN 744
YLTK+ VPE E+ GL++
Sbjct: 208 YLTKHNVPEQRLNYFTEDVGLNH 230
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 23.0 bits (47), Expect = 3.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -2
Query: 878 CLLLVAYGSAFTLPLHENPVYGYLTKYGVPEAERIRKAEEAGLSNTRIVGGS 723
C + Y S+ + V +L+ E IRK +E+ + I+GGS
Sbjct: 217 CTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTIRKCDESSPHDQVIIGGS 268
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 5.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 112 IPIKIGRLFLVTTRGPPESPRQVPTPPRPLVHKFEDC 222
IP IG L P Q+P PR + EDC
Sbjct: 69 IPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDC 105
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 5.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 112 IPIKIGRLFLVTTRGPPESPRQVPTPPRPLVHKFEDC 222
IP IG L P Q+P PR + EDC
Sbjct: 69 IPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDC 105
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -2
Query: 164 SGGPLVVTRNNRPILIGITSFGS 96
+G P+V+ N+ + +G+++ GS
Sbjct: 1201 AGKPIVLASGNKNVGVGVSNSGS 1223
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,905
Number of Sequences: 438
Number of extensions: 6500
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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