Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17c11f
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 48 9e-06
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 43 3e-04
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 33 0.28
AF098996-1|AAM34815.1| 523|Caenorhabditis elegans Hypothetical ... 31 0.65
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 31 1.1
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical pr... 29 2.6
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical ... 29 4.6
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 28 6.1
Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical ... 28 8.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 47.6 bits (108), Expect = 9e-06
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Frame = +1
Query: 175 RIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGASLVTTNRLLTAAHCWFDGTNQXXX 354
R++GGS ++ +P+ LL + G R CG SL+ N +LTAAHC+ ++
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRL---GHHR---CGGSLIDPNFVLTAAHCF--AKDRRPT 108
Query: 355 XXXXXXXXXXFSGGTRVETSSIVMHPNWSPATIRN-DVAVIYLPSPVTLSDTINTIALPS 531
G+ +++ +HP ++ + D A++ + PV S T I LPS
Sbjct: 109 SYSVRVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPS 168
Query: 532 GQELQENFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCT 672
++ V +G+G T S++ L +++ +++ C+
Sbjct: 169 LPAVENRL----CVVTGWGSTIEGSSLSA-PTLREIHVPLLSTLFCS 210
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 42.7 bits (96), Expect = 3e-04
Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 7/205 (3%)
Frame = +1
Query: 148 AEEAGLSN-TRIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGASLVTTNRLLTAAHC 324
A +A S R+VGG G FP+ L N + CGAS++ L+TAAHC
Sbjct: 16 ARDAAKSRIARVVGGFETVPGAFPWTAALR-----NKATKAHHCGASILDKTHLITAAHC 70
Query: 325 WFDGTNQXXXXXXXXXXXXXFSGGTR--VETSSIVMHPNWSPATIRNDVAVIYLPSP-VT 495
+ + + G I +P + +D+A++ +P P +
Sbjct: 71 FEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKD-IFSHDIAILEIPYPGIE 129
Query: 496 LSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTF 675
++ I LPS + G V SG+G S + + L + +IN F C
Sbjct: 130 FNEYAQPICLPSKDFVYT--PGRQCVVSGWG----SMGLRYAERLQAALIPIINRFDCVN 183
Query: 676 AFPFV--LQSSNLCTSG-RGGVGTC 741
+ + S C GG+ +C
Sbjct: 184 SSQIYSSMSRSAFCAGYLEGGIDSC 208
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 44 YWWLTAVLLHCLCMKIRYTVTLLSMVYQKQRGFARLKRQD 163
YWW V LC I YT+ LL Y++ + ++ +D
Sbjct: 291 YWWFLLVSFISLCSAIHYTIILLVPQYRRHEFKSMIRTED 330
>AF098996-1|AAM34815.1| 523|Caenorhabditis elegans Hypothetical
protein T11F1.7 protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 580 GFGLTSSSGSITTNQVLSHVNLDVINNFV 666
G+G TSS SIT N L+ N+DVI+NF+
Sbjct: 115 GYGCTSSGLSITNNSQLT--NIDVISNFL 141
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 271 VCGASLVTTNRLLTAAHCW 327
+CG +L+T +LTAAHC+
Sbjct: 61 ICGGTLITLKHVLTAAHCF 79
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 265 TGVCGASLVTTNRLLTAAHCWFDG 336
T VCG L+ + ++T+AHC F G
Sbjct: 43 TNVCGGVLIAPSIVITSAHCVFSG 66
>Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical
protein F28D1.8 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = +1
Query: 394 GTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAV 573
G R ++ PN + D V P+P + T + G E V +
Sbjct: 187 GNRSTIMILLQKPNTMKEKEKEDQKVSNNPAPAASASTEGATTVTEGTTAAETTVATETT 246
Query: 574 ASGFGLTSSSGSITT 618
A+G G T ++ + T
Sbjct: 247 ATGTGTTEAAATTVT 261
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 392 PLKSVTEPRTTVTLVPWLVPSNQQ*AAVNSLLVVTSEAPQTPVRGCPLTTMVISRPP 222
P S T P T L+ ++PS A ++L +S + P R P TT + PP
Sbjct: 303 PALSTTRP-TIDDLLGEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPP 358
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -1
Query: 392 PLKSVTEPRTTVTLVPWLVPSNQQ*AAVNSLLVVTSEAPQTPVRGCPLTTMVISRPP 222
P S T P T L+ ++PS A ++L +S + P R P TT + PP
Sbjct: 483 PALSTTRP-TIDDLLGEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPP 538
>AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical
protein Y45G12C.6 protein.
Length = 274
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 4 YTVMMKTFVATCLLLVAYGSAFTLPLHENPVYGYLT 111
YT++++T + C+L + G TLP + G +T
Sbjct: 186 YTLIIQTLIPMCILFIPTGFLLTLPFFDVKYVGRVT 221
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = -3
Query: 474 NDGHIITNGSRRPIRMHYNRTGLNSGATAEECHGTKNDRYARALVGAIEPAVSSCQ*SVS 295
+DG + NG ++P+ + ++ AE + +D A+ L +PA + Q +
Sbjct: 87 DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKPAQTPAQKKAA 146
Query: 294 GNKRSSAD 271
+ S +D
Sbjct: 147 SSSDSDSD 154
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = -3
Query: 474 NDGHIITNGSRRPIRMHYNRTGLNSGATAEECHGTKNDRYARALVGAIEPAVSSCQ*SVS 295
+DG + NG ++P+ + ++ AE + +D A+ L +PA + Q +
Sbjct: 87 DDGAVKKNGVQKPVNVAAKKSATPVQKKAESSSSSDSDAPAKKLTPVKKPAQTPAQKKAA 146
Query: 294 GNKRSSAD 271
+ S +D
Sbjct: 147 SSSDSDSD 154
>Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical
protein R06B9.6 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 440 LLLPFVMMWPSFTYPVPLLCLIQSIR 517
++L F + W S TY +P L LI +R
Sbjct: 285 VILDFPIEWISLTYRIPFLLLISDLR 310
>AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical
protein T04B8.3 protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 740 QVPTPPRPLVHKFEDCKTKGKANVQTKLFITSRFT 636
++ P PL H + + K KGK +V + T +FT
Sbjct: 188 ELEAEPFPLYHIYGNTKAKGKMHVLVAPYSTQKFT 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,830,825
Number of Sequences: 27780
Number of extensions: 384829
Number of successful extensions: 1207
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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