Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c07f
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.51 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   0.89 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   0.89 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   2.7  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   8.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.3  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 99  ASTTEYGCPENAHWTDDPCVRTCDDPYLTNTAC 197
           A+ TEY     A    DP V +C   + ++T C
Sbjct: 116 ATATEYKYSAAAPGPSDPSVSSCHQGFSSSTWC 148


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +3

Query: 87  MALEASTTEYGCPENAHWT--DDPCVRTCDDP 176
           + LE +  EYGCP    +   D      C+DP
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDADGTGNCEDP 214


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +3

Query: 87  MALEASTTEYGCPENAHWT--DDPCVRTCDDP 176
           + LE +  EYGCP    +   D      C+DP
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDADGTGNCEDP 214


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 120 CPENAHWTDDP 152
           CP N  W +DP
Sbjct: 518 CPNNYPWVNDP 528


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 330 TFNKITKKDYKSL 292
           TF+  TK DYKSL
Sbjct: 29  TFSDDTKPDYKSL 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 171  DPYLTNT--ACVGALIQTCHCNDGLVFNADRK 260
            DP+  N    CV   ++  +C  GL +N +RK
Sbjct: 1111 DPHNCNAYYRCVLGELRKQYCAGGLHWNKERK 1142



 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 315  TKKDYKSL*HFNNQKW 268
            T  DYK + +F N  W
Sbjct: 2317 TSDDYKVVCYFTNWAW 2332


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 134 GIFRASIFGSAGLESHHGDNQEHD 63
           G FR SI  +A  +  +G+N E D
Sbjct: 210 GFFRRSITKNAVYQCKYGNNCEID 233


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory
          receptor candidate 16 protein.
          Length = 452

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 57 YFIVFLIVAVMALE 98
          YF++F+I+ ++  E
Sbjct: 45 YFVIFIILTIVFFE 58


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 219 CHCNDG 236
           CHC+DG
Sbjct: 170 CHCSDG 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,517
Number of Sequences: 336
Number of extensions: 1428
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)