Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c05f
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.5  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   6.1  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 315 SYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 419
           S++AI T LQ   +K VP G    V  YFE  E+V
Sbjct: 646 SWQAIATALQ---MKGVPAGLQRIVRSYFENRELV 677


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 497  IENKSPVIFSCEVAHHI*YALWVQLIDYLDSFKINQH 387
            +E+ + V+F CEV H I     V+L+ Y  S  +N++
Sbjct: 957  VESVAHVLFQCEVFHEI----RVELLGYGTSDPVNEN 989


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 210  LHKVEEGHVGVYYR 251
            LH++E+G VG+Y R
Sbjct: 1052 LHQLEDGEVGIYRR 1065


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 248 SGWSFITSYKSSWFSHDDTTSNIIQSHSDNFTN 346
           +G + I    SSW    D+T   +QS +DN T+
Sbjct: 722 TGMAGINGLSSSWHKVLDSTQLRLQSTTDNATD 754


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 575  DLIKQINVYLVQGMGTTELIQFMVHFIE 492
            DL + + VYL +G G+  L+   ++ +E
Sbjct: 3297 DLAEDVEVYLNKGQGSMNLLDERINALE 3324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,233
Number of Sequences: 2352
Number of extensions: 15498
Number of successful extensions: 276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)