Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17c03f
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.85 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   2.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.6  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 53  MLNLTNIHIYPIKLFYVSLLY*FYC 127
           +L L  I+ + + LF++  +Y FYC
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYC 151


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 72  FTFTQLNYFTFHCFISFIVRI 134
           F  T   Y+ FHC I F V +
Sbjct: 592 FKATNPGYWLFHCHIEFHVEV 612


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 172 RTLCKINNSNYESILT 125
           + +CK+NN +Y++ L+
Sbjct: 203 KQVCKLNNGHYKNFLS 218


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +1

Query: 415 RTEHHAMIVFVKYFLWIL 468
           +  H+ + +FV  F W++
Sbjct: 92  KLRHYLIFIFVNVFFWVI 109


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 172 RTLCKINNSNYESILT 125
           + +CK+NN +Y++ L+
Sbjct: 28  KQVCKLNNGHYKNFLS 43


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 3  LFFFLFKHYG 32
          L+ FLF HYG
Sbjct: 8  LYLFLFVHYG 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,845
Number of Sequences: 336
Number of extensions: 1806
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)