Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17b23f
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28069-1|AAA86527.1|  144|Drosophila melanogaster cni protein.        103   2e-22
BT011529-1|AAS15665.1|  144|Drosophila melanogaster RE07818p pro...   103   2e-22
AE014134-2698|AAF53522.1|  144|Drosophila melanogaster CG5855-PB...   103   2e-22
AE014134-2697|AAF53521.1|  144|Drosophila melanogaster CG5855-PA...   103   2e-22
AE014134-547|AAF51153.1|  157|Drosophila melanogaster CG17262-PA...    32   0.62 
AY051565-1|AAK92989.1|  496|Drosophila melanogaster GH21352p pro...    29   5.8  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   7.7  

>U28069-1|AAA86527.1|  144|Drosophila melanogaster cni protein.
          Length = 144

 Score =  103 bits (248), Expect = 2e-22
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 21  MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSLFIT*VYV 200
           MAF+F AF YIVALI DAFLIFF+IFHVIAFDELKTDYKNPIDQCNSLNP+ L    +++
Sbjct: 1   MAFNFTAFTYIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHI 60

Query: 201 FLN 209
           FLN
Sbjct: 61  FLN 63



 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 48/93 (51%), Positives = 53/93 (56%)
 Frame = +1

Query: 235 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 414
           LVLPEY             GEWFSL INIPLI YHI RY  RPVMSGPGLYDPT+++  D
Sbjct: 51  LVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTD 110

Query: 415 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIA 513
            L    REGWIK             GM+  LI+
Sbjct: 111 TLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>BT011529-1|AAS15665.1|  144|Drosophila melanogaster RE07818p
           protein.
          Length = 144

 Score =  103 bits (248), Expect = 2e-22
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 21  MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSLFIT*VYV 200
           MAF+F AF YIVALI DAFLIFF+IFHVIAFDELKTDYKNPIDQCNSLNP+ L    +++
Sbjct: 1   MAFNFTAFTYIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHI 60

Query: 201 FLN 209
           FLN
Sbjct: 61  FLN 63



 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 48/93 (51%), Positives = 53/93 (56%)
 Frame = +1

Query: 235 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 414
           LVLPEY             GEWFSL INIPLI YHI RY  RPVMSGPGLYDPT+++  D
Sbjct: 51  LVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTD 110

Query: 415 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIA 513
            L    REGWIK             GM+  LI+
Sbjct: 111 TLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>AE014134-2698|AAF53522.1|  144|Drosophila melanogaster CG5855-PB,
           isoform B protein.
          Length = 144

 Score =  103 bits (248), Expect = 2e-22
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 21  MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSLFIT*VYV 200
           MAF+F AF YIVALI DAFLIFF+IFHVIAFDELKTDYKNPIDQCNSLNP+ L    +++
Sbjct: 1   MAFNFTAFTYIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHI 60

Query: 201 FLN 209
           FLN
Sbjct: 61  FLN 63



 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 48/93 (51%), Positives = 53/93 (56%)
 Frame = +1

Query: 235 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 414
           LVLPEY             GEWFSL INIPLI YHI RY  RPVMSGPGLYDPT+++  D
Sbjct: 51  LVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTD 110

Query: 415 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIA 513
            L    REGWIK             GM+  LI+
Sbjct: 111 TLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>AE014134-2697|AAF53521.1|  144|Drosophila melanogaster CG5855-PA,
           isoform A protein.
          Length = 144

 Score =  103 bits (248), Expect = 2e-22
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 21  MAFSFPAFAYIVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPVSLFIT*VYV 200
           MAF+F AF YIVALI DAFLIFF+IFHVIAFDELKTDYKNPIDQCNSLNP+ L    +++
Sbjct: 1   MAFNFTAFTYIVALIGDAFLIFFAIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHI 60

Query: 201 FLN 209
           FLN
Sbjct: 61  FLN 63



 Score = 98.3 bits (234), Expect = 8e-21
 Identities = 48/93 (51%), Positives = 53/93 (56%)
 Frame = +1

Query: 235 LVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNAD 414
           LVLPEY             GEWFSL INIPLI YHI RY  RPVMSGPGLYDPT+++  D
Sbjct: 51  LVLPEYLLHIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNRPVMSGPGLYDPTTVLKTD 110

Query: 415 VLTSCQREGWIKXXXXXXXXXXXXXGMIVVLIA 513
            L    REGWIK             GM+  LI+
Sbjct: 111 TLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>AE014134-547|AAF51153.1|  157|Drosophila melanogaster CG17262-PA
           protein.
          Length = 157

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = +1

Query: 223 RLFQLVLPEYXXXXXXXXXXXXSGEWFSLLINIPLILYHIHRYYTRPVMSGPGLYDPTSI 402
           RL   V+P++             G W   L+N+P++++  +  + R      G+YDP  I
Sbjct: 46  RLNFWVIPKFGSHALLCVLLLLGGHWVMFLLNLPMVIWLFYELH-RQRRDSLGVYDPVDI 104

Query: 403 MNADVL 420
            +  +L
Sbjct: 105 HSRGLL 110


>AY051565-1|AAK92989.1|  496|Drosophila melanogaster GH21352p
           protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 310 LINIPLILYHIHRYYTRPVMSGPGLYDPTSIMNADVLTSCQREGWIK 450
           LI  P+   H  R   RP  S  G+Y  T +  + ++++ Q+ GW++
Sbjct: 32  LITQPINGLHYIRNRLRPPKSRNGIYYSTDLDKSALVSNFQKRGWLQ 78


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 310   LINIPLILYHIHRYYTRPVMSGPGLYD 390
             ++NIP +   +H  Y  PV+  P +YD
Sbjct: 19240 VVNIPSVAQPVHPTYQPPVVERPAIYD 19266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,112,160
Number of Sequences: 53049
Number of extensions: 527383
Number of successful extensions: 1252
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)