Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17b03f
(763 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ370048-1|ABD18609.1| 144|Anopheles gambiae putative secreted ... 25 3.4
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 25 3.4
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 25 3.4
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 24 4.5
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 24 4.5
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 24 4.5
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 24 4.5
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 4.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 5.9
AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 24 5.9
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 7.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 7.8
>DQ370048-1|ABD18609.1| 144|Anopheles gambiae putative secreted
polypeptide protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 174 GRWCRRWYRPAFGPSTEAESSGDQAGFIRHSA 269
G C + ++ PST A +GD + F H+A
Sbjct: 106 GARCTQCSLLSYDPSTHAPDAGDPSYFASHAA 137
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 24.6 bits (51), Expect = 3.4
Identities = 26/94 (27%), Positives = 37/94 (39%)
Frame = +1
Query: 217 LLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAG 396
LL+ +P V L AP PG +A +S K P SAA ++ I
Sbjct: 69 LLQTHPSVPSLKPVAGAPAAPGPSA--------LPLSSRKSPTVSSAAALNSGFPSIANP 120
Query: 397 VPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKA 498
PR P D + A + R+ +LS +A
Sbjct: 121 NPRSPFRHLDFSTSATAELRRNPSLSAPDECARA 154
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 24.6 bits (51), Expect = 3.4
Identities = 26/94 (27%), Positives = 37/94 (39%)
Frame = +1
Query: 217 LLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAG 396
LL+ +P V L AP PG +A +S K P SAA ++ I
Sbjct: 69 LLQTHPSVPSLKPVAGAPAAPGPSA--------LPLSSRKSPTVSSAAALNSGFPSIANP 120
Query: 397 VPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKA 498
PR P D + A + R+ +LS +A
Sbjct: 121 NPRSPFRHLDFSTSATAELRRNPSLSAPDECARA 154
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 155 CDVVEKFFAPFCTARAAGFRARENIFVVCLTC 60
C E FF PFC + A + + C+ C
Sbjct: 47 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 155 CDVVEKFFAPFCTARAAGFRARENIFVVCLTC 60
C E FF PFC + A + + C+ C
Sbjct: 47 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 155 CDVVEKFFAPFCTARAAGFRARENIFVVCLTC 60
C E FF PFC + A + + C+ C
Sbjct: 47 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 155 CDVVEKFFAPFCTARAAGFRARENIFVVCLTC 60
C E FF PFC + A + + C+ C
Sbjct: 47 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 24.2 bits (50), Expect = 4.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 155 CDVVEKFFAPFCTARAAGFRARENIFVVCLTC 60
C E FF PFC + A + + C+ C
Sbjct: 623 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 654
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 295 GRLRRRGSQALCRIKPAWSPEDSASVEGPKAGRYHRRHQRP 173
GRL S AL PA +P + ++ GP G R P
Sbjct: 362 GRLPADNSSALNSPNPARAPPRNFTMPGPGPGIGEREKSNP 402
>AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein
protein.
Length = 178
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 398 TPAGMTTTSASLMAADSSS 342
T A TTT+AS ADSSS
Sbjct: 126 TEAAATTTAASETTADSSS 144
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 7.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 600 DAEHAVRVVHSRLLEHFRGN 541
+A+ +R H + EHF+GN
Sbjct: 663 NAQQEIRHSHINVTEHFKGN 682
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 7.8
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = -2
Query: 636 DEGGSADYVQSGDAEHAVRVVHSRLLEHFRGNRHCRVNRVCDDGHNSFGC 487
DE GS D S D V + R R CR+ D N FGC
Sbjct: 447 DERGSLDNTPSCDPVTGVCSCKENV--EGRHCRECRLGYFNLDAENKFGC 494
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.132 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,711
Number of Sequences: 2352
Number of extensions: 18018
Number of successful extensions: 46
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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