Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17b02f
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 32 0.33
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 31 1.0
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 29 2.3
AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical ... 29 3.1
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.1
AC006790-1|AAY55890.1| 309|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81502-3|CAB04104.1| 366|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical ... 28 7.1
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 7.1
AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.1
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 9.4
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 9.4
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 177 QELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVENVEAPVENADFPADSV---- 344
+E A+A +E SEN D + + D IP ++V ++ +EN+E +++++ A++
Sbjct: 17 EEHAVAPVEDSENPDVIQLDDDVIPEEDVPDDEETAENLENLENVLDDSEIIAENSGEAD 76
Query: 345 SFVENLDAPVEDAD 386
VE D P D D
Sbjct: 77 QEVEEEDNPFADDD 90
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 489 PVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEA 668
P+ A +Q AP+++ + V + +EIEN IS V P DE+ N + I+
Sbjct: 213 PIRRAAIQPAPIHLNESLVVEVIDEIENVPVNTQISPVMPP---DEESNPVEIITCDQNQ 269
Query: 669 QPED 680
QP D
Sbjct: 270 QPVD 273
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 498 PQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRH 319
PQ+ R + QP PQ +H+R ++ Q PQ + R + Q+Q R
Sbjct: 524 PQMSQMRMQQQQPQQPNMNSPQSQHQRAPNNMNMQQNLPNPQQQMR--IPQAQNQMQQRI 581
Query: 318 SQLELRHF-LRSLQNQQG 268
Q+ + ++ QN G
Sbjct: 582 PQVSPQQMQMQQQQNMNG 599
>AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical
protein ZC178.1 protein.
Length = 542
Score = 29.1 bits (62), Expect = 3.1
Identities = 32/118 (27%), Positives = 51/118 (43%)
Frame = -2
Query: 506 IGVLNWSIDVVYEADRISRDIGVLNWSIDVVYEVYRISQDIGVLNWSIEVFYEAYRVSRE 327
IGV+ +D V + IGVL +D V V + IGV+ ++ V
Sbjct: 427 IGVVLEELDSVELVMSVEYTIGVLLEELDSVELVMSVEDTIGVVLEELDSVELVMSVEYT 486
Query: 326 IGILNWSFDIFYEVYRINREIDVVNGNFNVKNRNVVYIFAQFNPGQGEFLNDFVGDDV 153
IG+L D V + I VV G +N +VV + P F+++ +G++V
Sbjct: 487 IGVLLEELDSVELVMPVVDTIGVVTG-LGTENCDVVENSFEVLPDLWFFMSN-MGENV 542
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = -2
Query: 506 IGVLNWSIDVVYEADRISRDIGVLNWSIDVVYEVYRISQDIGVLNWSIEVFYEAYRVSRE 327
IGV+ +D V + IGV+ +D V V + IGV+ ++ V
Sbjct: 187 IGVVLEELDSVELVRSVEDTIGVVLEELDSVELVMSVEDTIGVVREKLDSVELVMSVEDT 246
Query: 326 IGILNWSFDIFYEVYRINREIDVVNGNFN 240
IG++ D V + I VV N
Sbjct: 247 IGVVREKLDSVELVMSVEDTIGVVLEELN 275
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 474 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDE 626
D DAP+ D +N+VDE +++ ++E+D E E+ AE D+
Sbjct: 2429 DAQDAPLAAPDAPPG-INLVDEIMQQVQRDVEDDEEDEDGDQNEHEAEEDD 2478
>AC006790-1|AAY55890.1| 309|Caenorhabditis elegans Hypothetical
protein Y49F6B.13 protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 290 EVYRINREIDVVNGNFNVKNRNVVYIFAQFNPG--QGEFLN 174
+V+R+ + I NGN N+ ++ F+PG +G F+N
Sbjct: 212 DVFRVLKFISPQNGNSNIDASKLIQQLTGFSPGFREGHFVN 252
>Z81502-3|CAB04104.1| 366|Caenorhabditis elegans Hypothetical
protein F14B6.3 protein.
Length = 366
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 495 EDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQP 674
ED + + DE + ++I +S+ S + ELD+D NG +L ++
Sbjct: 295 EDLEESENEPRMSDEAEKLVEDKIIEESDEDSFDIIGRDEELDDDSNGKEEEELELDVTQ 354
Query: 675 ED 680
ED
Sbjct: 355 ED 356
>AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical
protein Y105E8B.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 237 DIEIPVDNVDFPVDSVNFVENVEAPVENADFPADSVSFVENLDAPV 374
DIE+P ++ P DS N EN E E + AD VE A V
Sbjct: 415 DIELPPEDFKRPADSENDDENDEDEEEGEEEDADGHVAVEEQVAKV 460
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 480 VDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAEL 620
+D P D+++ +A N+ VEK+ E+++ G + AEL
Sbjct: 858 LDEPPSDSEVYIAKTNLAPVRVEKSAEKVKKSRNSGQKLSTDSSAEL 904
>AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical
protein Y37D8A.1 protein.
Length = 183
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 477 CLRS*QNQPGHRRPQLE-HRRCLRSLQNQPGHRRPQLEHRGF-LRSLQSQPGNRHSQLEL 304
CLR Q P Q + H L L PG GF L S+ P ++ + E+
Sbjct: 80 CLRKLQKSPNKIAGQKDLHALALSHLLPIPGEN-------GFPLNSMYKAPQSKPDEDEM 132
Query: 303 RHFLRSLQNQQGNRRCQREF 244
R +L+ ++ + G R C F
Sbjct: 133 RAYLQQIRQEIGARLCDLAF 152
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +3
Query: 489 PVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYP----AELDE--DGNGLVIV 650
PVE +V P+ + + E I +D E S SW YP A+ E D N L
Sbjct: 566 PVESNPEEVTPMVTAPISIHSSFENISSDFESLSPSWGGYPDLEAAQRLEVIDDNLLDFS 625
Query: 651 DLPIEAQ 671
D+ +EAQ
Sbjct: 626 DVAVEAQ 632
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 474 DNVDAP-VEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIV 650
DN +A VE+ D Q+ DE + +E + +V I+ EY + +G I
Sbjct: 32 DNSNAQLVEEGDDQLVTAEADDEKSAQQVDEDRTEDQVPDITGTEYVDPMTTSMDG--IE 89
Query: 651 DLPI--EAQPED 680
DLP EAQ ED
Sbjct: 90 DLPANDEAQFED 101
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 474 DNVDAP-VEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIV 650
DN +A VE+ D Q+ DE + +E + +V I+ EY + +G I
Sbjct: 32 DNSNAQLVEEGDDQLVTAEADDEKSAQQVDEDRTEDQVPDITGTEYVDPMTTSMDG--IE 89
Query: 651 DLPI--EAQPED 680
DLP EAQ ED
Sbjct: 90 DLPANDEAQFED 101
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 474 DNVDAP-VEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIV 650
DN +A VE+ D Q+ DE + +E + +V I+ EY + +G I
Sbjct: 32 DNSNAQLVEEGDDQLVTAEADDEKSAQQVDEDRTEDQVPDITGTEYVDPMTTSMDG--IE 89
Query: 651 DLPI--EAQPED 680
DLP EAQ ED
Sbjct: 90 DLPANDEAQFED 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,339,254
Number of Sequences: 27780
Number of extensions: 311975
Number of successful extensions: 1344
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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