Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17b01f
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166... 33 0.31
08_02_0657 - 19749835-19751942,19753123-19753561 30 1.6
03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419 30 1.6
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 30 1.6
01_02_0019 + 10262685-10262909,10263014-10263076,10263155-102633... 30 1.6
05_03_0288 - 11653136-11654074,11655252-11655965 30 2.2
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 30 2.2
11_06_0176 + 20929629-20929791,20929918-20930333,20930449-209307... 29 2.9
10_01_0194 + 2130274-2131725 29 2.9
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 2.9
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 5.0
07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469 29 5.0
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 29 5.0
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 29 5.0
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 28 6.6
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 28 6.6
05_07_0140 - 27982037-27983794 28 6.6
09_04_0541 + 18437075-18440062 28 8.7
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 28 8.7
03_02_0589 + 9673928-9674123,9674557-9674713,9675588-9675669,967... 28 8.7
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 28 8.7
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 28 8.7
>05_06_0152 -
26008495-26009074,26010555-26011361,26016536-26016657,
26016860-26017462
Length = 703
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = -1
Query: 548 FQLVHPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQL 369
F + + +CS+G LVN LE R ++ H P L C+R L + RR +
Sbjct: 239 FIIRNAQCSKGFLVNTFESLEPRVVNALRDSRCHHGGPALPPFYCIRPLVEKADERRDRA 298
Query: 368 EHRGFLRSLQSQP 330
E L L QP
Sbjct: 299 ERHECLAWLDRQP 311
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAE 616
D +AP + +L V + +V +P KT E+E ++E + + E A+
Sbjct: 769 DEEEAPATEPELPVGQLRLVAKPKTKTKAELEAEAEAAAKAKAEAEAK 816
>03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419
Length = 464
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 267 KSTLSTGISMSK-IATLSTFSLNSIPAKASS*MTSSGMMYIPASMLSYFGIGISAIWTGL 91
++ TGIS+ +A SL + PA AS + ++ + ++PAS +S +G + +G
Sbjct: 69 RALAGTGISLVVGVANGDIPSLAADPAAASRWLAANVLPFVPASTISVVAVGNEVLESGD 128
Query: 90 IDAAAA 73
AAA
Sbjct: 129 ASLAAA 134
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 164 DEVIQELALAGIELSENVDNVAIFDIE-IPVDNVDFPVDSVNFVENVEAPVENADFPADS 340
D I ELA +++ N D AI +I+ I +D +F D + + + +N A
Sbjct: 1364 DAKITELAQTNLDIKNNADQRAIQNIQCINMDEAEFVTDDLK-SDCLAMHADNVQRDASL 1422
Query: 341 VSFVENLDAPVEDAD 385
+E A +E AD
Sbjct: 1423 TKNIEESSASLEGAD 1437
>01_02_0019 +
10262685-10262909,10263014-10263076,10263155-10263316,
10263407-10263589,10263676-10263806,10264251-10264419,
10264524-10264653,10265702-10265898
Length = 419
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 497 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 595
+A+LQ ++ ++PV NEE ND +V S+S
Sbjct: 376 EAELQDEFPHVQEDPVSHANEEFPNDEDVDSLS 408
>05_03_0288 - 11653136-11654074,11655252-11655965
Length = 550
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 98 VQIADIPIPKYESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFDIEIP 250
V ++ +P+ E + G ++P ++ +A+ G+E+ N V +F P
Sbjct: 109 VMVSFFGLPEKEVVRIGKAVLPKFFLEGMAMEGLEVVRNAKKVVVFSPLFP 159
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 595
D+ D VED D ++ N +E E+ +E ENDS S S
Sbjct: 331 DDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSDDSDS 371
>11_06_0176 +
20929629-20929791,20929918-20930333,20930449-20930736,
20931034-20931147,20931245-20931352,20931701-20931744,
20933106-20933200,20934103-20934182,20934278-20934391,
20934476-20934628,20934740-20934832
Length = 555
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 119 IPKYESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVNFVE 295
+P Y ++D I PD +EL ++ +E E D+ + DI + D D + FV+
Sbjct: 173 LPTYVALDLAKSIEPDADKEELRMSVVEPIEKADDPSSHDIPVGSTKGDEYDDRICFVK 231
>10_01_0194 + 2130274-2131725
Length = 483
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 319 ILNWSFDIFYEVYRINREIDVVNGNFNVKNRNVVYIFAQ 203
+L W+ D+ + + +NR I V NF++ ++V +F Q
Sbjct: 351 VLRWNLDVNFWISILNRCITVAEKNFSLYGKHVRSLFEQ 389
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS---EVGSISWVEYPAELDEDGNGLV 643
D+ D VED D ++ N +E E+ +E ENDS S S + ++L E G+
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSDLSESGDSKT 402
Query: 644 I 646
+
Sbjct: 403 V 403
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 577
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 577
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 520 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 554
>07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469
Length = 198
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 58 RTHWSGGRRINQTRPNRGYPNTEIRKHRRWNVHHPRRSHSRTRLG 192
R W G + +TR R +P RRW H PRR T +G
Sbjct: 10 RWRWGGASSLARTRRRRLFP-----AWRRWIRHCPRRIRPETAVG 49
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 530 VDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLP 709
V+E +E+ EEIE + E E E+DE+ G + ++ ED +++ +P
Sbjct: 74 VEEEIEEEEEEIEEEEEEVREEVQEAGEEVDEEQQG---ANEEMQKSKEDADESSKSAIP 130
Query: 710 VENVAE 727
V+ E
Sbjct: 131 VQKQEE 136
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 577
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
>06_03_1180 +
28218386-28218649,28218725-28219202,28219309-28219697,
28219785-28220426,28220466-28221368
Length = 891
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 473 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 595
D+ D +ED D ++ N +E E+ +E ENDS S S
Sbjct: 318 DDDDVELEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 358
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 76 GRRINQTRPNRGYPNTEIR-KHRRWNVHHPRRSHSRTRLGRD*IERKCRQRCDF*H 240
G R + +RGY E R K+R N + R+ +R GRD E + R R D H
Sbjct: 461 GERSSSRYDDRGYSKHESRGKYRDGNDDYRRQPGGGSRYGRDKYEGERRYREDDGH 516
>05_07_0140 - 27982037-27983794
Length = 585
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 536 HPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRP 375
HPR N+RPQL R R + + R + E R R QN H P
Sbjct: 101 HPRFGPKWRFNQRPQLPQR---RDEEVEARRREAEKERARRERHFQNNRSHHHP 151
>09_04_0541 + 18437075-18440062
Length = 995
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 78 PPHQSNPSKSRISQYRNTKASTLECTSSPT 167
PP Q P R Q+R TKAS + ++ T
Sbjct: 82 PPQQPQPQTPRQRQHRETKASDVAAAAAST 111
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = -1
Query: 545 QLVHPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLE 366
Q+ + Q + ++ QL+ ++ Q QP + QL R QN+P Q++
Sbjct: 975 QVQQQQQQQQQQQQQQQQLQLQQHALPVQQQPDQKYSQLPSSGDTRHEQNKPQKLESQMD 1034
Query: 365 HRGFLRSLQSQPGNRHSQLELRHFLRSLQNQQ 270
H+ L Q + Q+ L + Q QQ
Sbjct: 1035 HQSELVQQQQVYFQQQQQMYLMQQQQMYQQQQ 1066
>03_02_0589 +
9673928-9674123,9674557-9674713,9675588-9675669,
9675759-9675806,9676566-9676666,9676871-9676979,
9677004-9677093
Length = 260
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 506 LQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLE 685
L+ + V + + V +T E + E+ IS E+ + DG +++ +P A PED+E
Sbjct: 120 LRFSSVPLFNTAVRQTREGRQYRLEM--ISREEFDLKQSYDGKAILLQGVPRNAVPEDIE 177
Query: 686 K 688
+
Sbjct: 178 R 178
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 482 DAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 595
D VED D ++ N +E E+ +E ENDS S S
Sbjct: 233 DVEVEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 270
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 542 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEK 688
+EK E E D GSIS E +DE N +V ++L + +Q +++
Sbjct: 419 LEKIKEHFERD---GSISVAEITEHIDELVNKVVDLELMVSSQSSQIDR 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,131,206
Number of Sequences: 37544
Number of extensions: 386824
Number of successful extensions: 1386
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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