Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a24f
(764 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058337-1|AAL13566.1| 490|Drosophila melanogaster GH11113p pro... 99 6e-21
AE014296-1561|AAN11980.1| 490|Drosophila melanogaster CG5288-PC... 99 6e-21
AE014296-1560|AAF50337.2| 490|Drosophila melanogaster CG5288-PB... 99 6e-21
AE014296-1559|AAF50338.2| 490|Drosophila melanogaster CG5288-PA... 99 6e-21
X51652-1|CAA35964.1| 782|Drosophila melanogaster Bic-D protein ... 29 9.2
M31684-1|AAA28393.1| 782|Drosophila melanogaster protein ( D.me... 29 9.2
AY069452-1|AAL39597.1| 782|Drosophila melanogaster LD17129p pro... 29 9.2
AE014134-2851|AAF53616.1| 782|Drosophila melanogaster CG6605-PA... 29 9.2
>AY058337-1|AAL13566.1| 490|Drosophila melanogaster GH11113p
protein.
Length = 490
Score = 99.1 bits (236), Expect = 6e-21
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +1
Query: 460 RINQLNEKFEEEFGIKPNFTVKVPGRVNIIGEHIDYCGYPVLPMALEQSILIAVGLINEK 639
R+ QL F+++FG P+F V+VPGRVNIIGEH+DYCGY VLPMA+ QSI +AV N
Sbjct: 33 RVQQLTAFFKQQFGANPDFIVRVPGRVNIIGEHVDYCGYSVLPMAVSQSIFLAVAK-NPS 91
Query: 640 DLRIRNTNSKYCKFQMDISKPEDFDIXPDEDGKPFWYNYVL 762
D +++ N + KF + + I + G P WYNY L
Sbjct: 92 DSQLQLRNLEEAKFTGYDADLKTLRIELPKSGGPAWYNYFL 132
>AE014296-1561|AAN11980.1| 490|Drosophila melanogaster CG5288-PC,
isoform C protein.
Length = 490
Score = 99.1 bits (236), Expect = 6e-21
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +1
Query: 460 RINQLNEKFEEEFGIKPNFTVKVPGRVNIIGEHIDYCGYPVLPMALEQSILIAVGLINEK 639
R+ QL F+++FG P+F V+VPGRVNIIGEH+DYCGY VLPMA+ QSI +AV N
Sbjct: 33 RVQQLTAFFKQQFGANPDFIVRVPGRVNIIGEHVDYCGYSVLPMAVSQSIFLAVAK-NPS 91
Query: 640 DLRIRNTNSKYCKFQMDISKPEDFDIXPDEDGKPFWYNYVL 762
D +++ N + KF + + I + G P WYNY L
Sbjct: 92 DSQLQLRNLEEAKFTGYDADLKTLRIELPKSGGPAWYNYFL 132
>AE014296-1560|AAF50337.2| 490|Drosophila melanogaster CG5288-PB,
isoform B protein.
Length = 490
Score = 99.1 bits (236), Expect = 6e-21
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +1
Query: 460 RINQLNEKFEEEFGIKPNFTVKVPGRVNIIGEHIDYCGYPVLPMALEQSILIAVGLINEK 639
R+ QL F+++FG P+F V+VPGRVNIIGEH+DYCGY VLPMA+ QSI +AV N
Sbjct: 33 RVQQLTAFFKQQFGANPDFIVRVPGRVNIIGEHVDYCGYSVLPMAVSQSIFLAVAK-NPS 91
Query: 640 DLRIRNTNSKYCKFQMDISKPEDFDIXPDEDGKPFWYNYVL 762
D +++ N + KF + + I + G P WYNY L
Sbjct: 92 DSQLQLRNLEEAKFTGYDADLKTLRIELPKSGGPAWYNYFL 132
>AE014296-1559|AAF50338.2| 490|Drosophila melanogaster CG5288-PA,
isoform A protein.
Length = 490
Score = 99.1 bits (236), Expect = 6e-21
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +1
Query: 460 RINQLNEKFEEEFGIKPNFTVKVPGRVNIIGEHIDYCGYPVLPMALEQSILIAVGLINEK 639
R+ QL F+++FG P+F V+VPGRVNIIGEH+DYCGY VLPMA+ QSI +AV N
Sbjct: 33 RVQQLTAFFKQQFGANPDFIVRVPGRVNIIGEHVDYCGYSVLPMAVSQSIFLAVAK-NPS 91
Query: 640 DLRIRNTNSKYCKFQMDISKPEDFDIXPDEDGKPFWYNYVL 762
D +++ N + KF + + I + G P WYNY L
Sbjct: 92 DSQLQLRNLEEAKFTGYDADLKTLRIELPKSGGPAWYNYFL 132
>X51652-1|CAA35964.1| 782|Drosophila melanogaster Bic-D protein
protein.
Length = 782
Score = 28.7 bits (61), Expect = 9.2
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 334 IRSSHINWQLGTNLLITRIQFQFKMNNQRHDEIPILKTTADTRINQLNEKFEEEFGIKPN 513
+RSS + ++ G I R+ + ++ NQ+ DE+ LK A+ ++ + E + E K
Sbjct: 194 LRSSQVEFE-GAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYA 252
Query: 514 FTVKVPGRVN 543
++ G +N
Sbjct: 253 LKKELDGHLN 262
>M31684-1|AAA28393.1| 782|Drosophila melanogaster protein (
D.melanogaster cytoskeleton-like bicaudalD protein
(BicD) mRNA, complete cds. ).
Length = 782
Score = 28.7 bits (61), Expect = 9.2
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 334 IRSSHINWQLGTNLLITRIQFQFKMNNQRHDEIPILKTTADTRINQLNEKFEEEFGIKPN 513
+RSS + ++ G I R+ + ++ NQ+ DE+ LK A+ ++ + E + E K
Sbjct: 194 LRSSQVEFE-GAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYA 252
Query: 514 FTVKVPGRVN 543
++ G +N
Sbjct: 253 LKKELDGHLN 262
>AY069452-1|AAL39597.1| 782|Drosophila melanogaster LD17129p
protein.
Length = 782
Score = 28.7 bits (61), Expect = 9.2
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 334 IRSSHINWQLGTNLLITRIQFQFKMNNQRHDEIPILKTTADTRINQLNEKFEEEFGIKPN 513
+RSS + ++ G I R+ + ++ NQ+ DE+ LK A+ ++ + E + E K
Sbjct: 194 LRSSQVEFE-GAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYA 252
Query: 514 FTVKVPGRVN 543
++ G +N
Sbjct: 253 LKKELDGHLN 262
>AE014134-2851|AAF53616.1| 782|Drosophila melanogaster CG6605-PA
protein.
Length = 782
Score = 28.7 bits (61), Expect = 9.2
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 334 IRSSHINWQLGTNLLITRIQFQFKMNNQRHDEIPILKTTADTRINQLNEKFEEEFGIKPN 513
+RSS + ++ G I R+ + ++ NQ+ DE+ LK A+ ++ + E + E K
Sbjct: 194 LRSSQVEFE-GAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYA 252
Query: 514 FTVKVPGRVN 543
++ G +N
Sbjct: 253 LKKELDGHLN 262
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,643,177
Number of Sequences: 53049
Number of extensions: 590970
Number of successful extensions: 1220
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -