Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a22f
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 45 8e-05
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 45 8e-05
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 38 0.009
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 38 0.012
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 37 0.015
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 34 0.11
10_08_0847 + 21006842-21007042,21007173-21007261,21012226-210124... 33 0.33
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 33 0.33
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 33 0.33
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 32 0.44
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 31 0.77
08_02_0739 + 20584264-20584626,20586943-20587011,20587696-205880... 31 1.3
11_06_0311 - 22279202-22279690,22279976-22280103,22281249-222813... 29 4.1
06_03_0347 + 19783824-19784348 29 4.1
10_08_0772 + 20471748-20473004 29 5.4
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 29 5.4
08_01_0974 - 9813896-9813950,9814537-9814572,9814666-9814708,981... 29 5.4
11_08_0040 + 27891797-27891823,27891934-27892091,27892169-278924... 28 7.1
08_01_0178 - 1509100-1511214 28 7.1
01_01_0189 - 1640581-1640832,1640936-1641132,1641243-1641608,164... 28 7.1
10_08_0771 + 20463872-20465113 28 9.4
09_06_0196 - 21481662-21481720,21481898-21483245 28 9.4
06_01_1004 - 7802989-7803498 28 9.4
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 363 CAKCGEFV-IGRVIKAMNSNWHPACFRCEECNVELADAGFIKHAGRAL---CHVCNARIK 530
CA C + GR + M+S WHP CFRC CN +++ F H + C+ K
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPK 316
Query: 531 ADGLQNYMCHKCHGVID 581
D +N++ +G+I+
Sbjct: 317 CDVCKNFIPTNRNGLIE 333
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/83 (21%), Positives = 35/83 (42%)
Frame = +3
Query: 138 KMPGLATMSLDNMYCTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEG 317
++P + S + C C + + + ++ +WH CF C C + + F E
Sbjct: 243 ELPPILFASSGSRTCAGCKNPIG-HGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHED 301
Query: 318 RKYCEQDFQVLFAPCCAKCGEFV 386
+ Y + ++ F P C C F+
Sbjct: 302 QPYHKSCYKDFFHPKCDVCKNFI 324
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 363 CAKC-GEFVIGRVIKAMNSNWHPACFRCEECNVELADAGFI---KHAGRALCHVCNARIK 530
CA C E GR + M + WHP CFRC CN + D F H C+ K
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 531 ADGLQNYMCHKCHGVID 581
D + ++ +G+I+
Sbjct: 618 CDVCKQFIPTNMNGLIE 634
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = +3
Query: 216 KIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLFAPCCAKCGEFVIGR 395
+ ++ G +WH CF C C + D F Y + ++ F P C C +F+
Sbjct: 569 RFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFIPTN 628
Query: 396 VIKAMNSNWHP 428
+ + HP
Sbjct: 629 MNGLIEYRAHP 639
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C P +++ +++G ++H +CF C C G + EG YC+ F+ LF
Sbjct: 9 CKVCTKTVYPMDQL-STDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLF 65
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C P EK V G+ +H +CF C+ + EG YC+ F LF
Sbjct: 108 CATCSKTAYPLEK-VTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLF 164
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
CT C P EK+ GE +H CF CA + + + G YC+ F LF
Sbjct: 104 CTACKKTVYPLEKMT-MEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLF 160
Score = 28.7 bits (61), Expect(2) = 0.045
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 243 WHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
+H +CF C+ C + +G YC+ F+ LF
Sbjct: 30 YHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66
Score = 25.8 bits (54), Expect(2) = 0.045
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 363 CAKCGEFVIGRVIKAMNSN-WHPACFRCEECNVELADAGFIKHAGRALC 506
C C + V M +H CF+C L +A + H G C
Sbjct: 104 CTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYC 152
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 363 CAKCGEFV-IGRVIKAMNSNWHPACFRCEECNVELAD 470
CA C + GR + M+S WHP CFRC C+ +++
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISE 214
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDF-QVL 350
C CG P E++ ++G ++H CF C C + EG YC+ + Q+L
Sbjct: 13 CDSCGRTVYPVEELA-ADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYDQIL 69
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C P EK VN NG +H +CF C EG+ YC+ LF
Sbjct: 112 CVVCNKTVYPLEK-VNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLF 168
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 CAKCGEFVIG-RVIKAMNSNWHPACFRCEECNVELADAGFIKHAGRALCHVCNARI 527
C C + V + S++H +CFRC L+ + + H G+ C ++++
Sbjct: 112 CVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQL 167
>10_08_0847 +
21006842-21007042,21007173-21007261,21012226-21012429,
21016334-21016568,21016760-21016952,21017472-21017503,
21019172-21019236,21020766-21020985,21021172-21021370,
21021728-21021768,21023366-21023404,21023699-21023734,
21023767-21023798,21024264-21024426,21024602-21024653,
21024699-21024794,21024911-21025023,21026536-21026615,
21027343-21027577,21027765-21027890,21027994-21028092
Length = 849
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +3
Query: 300 FYEFEGRKYCEQD--FQVLFAPCCAKCGEFVIGRVIKAMNSNWHPACFRCEECNVELADA 473
F E +G + +D + FA C C E + + N + CF C++C VEL
Sbjct: 589 FVELKGSSFFHEDGTTTLFFAETCPCCKEDSGIYLCCPLEENDNGKCFGCQKCGVELRHP 648
Query: 474 GFIKHAG--RALC 506
F + G R +C
Sbjct: 649 TFADYFGGHRDIC 661
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
CT C D ++ ++G +H CF C+ C + + +G YC+ F+ LF
Sbjct: 10 CTAC-DKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C P EK+ GE +H +CF C+ + + G YC+ F LF
Sbjct: 105 CAACQKTVYPLEKLT-LEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLF 161
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 363 CAKCG-EFVIGRVIKAMNSNWHPACFRCEEC 452
C C E G + + WHP CFRC C
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSC 144
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C P EK+ GE +H +CF C+ + + G YC+ F LF
Sbjct: 106 CAACQKTVYPLEKLT-LEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLF 162
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCEQDFQVLF 353
C C +K+ N ++H CF C C + FEG YC F LF
Sbjct: 12 CMACDKTVYLVDKLTADN-RVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLF 68
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 363 CAKCGEFV--IGRVIKAMNSNWHPACFRCEECNVELADAGFIKHAGRALC 506
C C + V I RV N+ +H +CF+C ++ + +I H G+ C
Sbjct: 110 CVGCNKTVYPIERVT-VNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 363 CAKCGEFV-IGRVIKAMNSNWHPACFRCEECNVELADAGFIKHAGRALC 506
C C + V + + A N +H ACFRC C L A + G C
Sbjct: 12 CMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYC 60
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCE 332
C C P E+ V N ++H +CF C + EG+ YC+
Sbjct: 110 CVGCNKTVYPIER-VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 159
>08_02_0739 +
20584264-20584626,20586943-20587011,20587696-20588006,
20588447-20588648,20588887-20588958
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 512 YMAQCSTSMLDKTGICKLYITLFTSEAGRMPIRVHRLYNAANHKLSTLCTAWCK*N 345
YM +C+ L G+ K+ L+ + IR+H + H L + +A CK N
Sbjct: 146 YMPRCTG--LTAEGVVKIVQVLYECKGNLNRIRLHGICRMTKHHLDAISSAMCKGN 199
>11_06_0311 -
22279202-22279690,22279976-22280103,22281249-22281355,
22282799-22282888,22283590-22283660
Length = 294
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 514 HTWHNARPACLIKPASASSTLHSSHRKQAG 425
H W N ++ P + S LH+ H + AG
Sbjct: 193 HIWGNGPNLAMVHPTNTLSPLHNQHHQSAG 222
>06_03_0347 + 19783824-19784348
Length = 174
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 459 ELADAGFIKHAGRALCHVCNARIKADGLQNYMCHKCHGVIDGEPLRYRGEVYHGYHFTCA 638
E A AG +H G C VC ++ G C + E + +++ H TC
Sbjct: 87 EFAYAGSARHGGGGECSVCLGAVQG-GEAVRRLPACKHLYHVECI----DMWLASHATCP 141
Query: 639 TCGVELDHTAREVKNRPGYAAND 707
C E++ + RP AA++
Sbjct: 142 ICRTEVEPPPEDDDGRPAPAADE 164
>10_08_0772 + 20471748-20473004
Length = 418
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 204 EPNEKIVNSNGELWHTNCFVCAQCFR 281
+P I++ GEL T C +C++CF+
Sbjct: 78 QPASAIIDVAGELVWTQCSMCSRCFK 103
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 180 CTRCGDGFEPNEKIVNSNGELWHTNCFVCAQCFRMFPDGVFYEFEGRKYCE 332
C R GF+ N+++V+ NG +W + + + + P F+ + + E
Sbjct: 595 CDRDHGGFDCNDELVSPNGHIWQSVFLIASNGAAILP--AFWALRQKAFAE 643
>08_01_0974 -
9813896-9813950,9814537-9814572,9814666-9814708,
9814881-9815277
Length = 176
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -3
Query: 608 FSPIT*RFSVNYSMALMTHVVLQPIRFDTRVTYMAQCSTSMLDKTGICKLYITLFTSEAG 429
+ P ++N S +T L+ R + CS ++D+TG C L++ + S
Sbjct: 11 YPPAPSPLTINESRRRLTTPDLEIPRASPSLDQPKPCSDEVMDRTGPCGLHLGVMPSR-- 68
Query: 428 RMPI 417
RMPI
Sbjct: 69 RMPI 72
>11_08_0040 +
27891797-27891823,27891934-27892091,27892169-27892463,
27892548-27892607,27892686-27893036
Length = 296
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 504 CHVCNARIKADGLQNYMCHKCHGVIDGEPLRYRGEVYHGYHFTCATCGVELDHTAREVKN 683
C++CN +I Y C C+ + RYR + H T +C + D A+ +
Sbjct: 33 CNLCN-KIVIQKNDKYHCRNCNKYPENTTPRYRLRLQISDHTTSTSCTI-FDDVAQSMLE 90
Query: 684 RP 689
P
Sbjct: 91 TP 92
>08_01_0178 - 1509100-1511214
Length = 704
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 555 CHKCHGVIDGEPLRYRGEVYHGYHFTC 635
C KC GVID E H +H C
Sbjct: 84 CDKCRGVIDHSQPTVTSECSHTFHLRC 110
>01_01_0189 -
1640581-1640832,1640936-1641132,1641243-1641608,
1641826-1642224,1642313-1642719,1642814-1642941
Length = 582
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 471 AGFIKHAGRALCHVCNARIKADGLQNYMCHKCHGVIDGEPLRY--RGEVY 614
A F +HAG C AR+ A Q + H I+ EP Y R EVY
Sbjct: 369 ASFRRHAGDIAARCCPARV-AQEFQQFQV-LLHRFIENEPYEYGLRPEVY 416
>10_08_0771 + 20463872-20465113
Length = 413
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 204 EPNEKIVNSNGELWHTNCFVCAQCFR 281
+P IV+ GEL T C C +CF+
Sbjct: 73 QPASAIVDVAGELVWTQCSACRRCFK 98
>09_06_0196 - 21481662-21481720,21481898-21483245
Length = 468
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 189 CGDGFEPNEKIVNSNGELWHTNCFVCAQ--CFRMFPDGVFYEFEGRKYCEQDFQV---LF 353
C DGFEP K SNG + C + C D VF E +G + ++ +V F
Sbjct: 321 CLDGFEPRSKEEWSNGR-FSRGCRRTEELPCGGDGGDAVFLEMQGMQLPDKFVRVRNKTF 379
Query: 354 APCCAKC 374
C A+C
Sbjct: 380 HECAAEC 386
>06_01_1004 - 7802989-7803498
Length = 169
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 657 DHTAREVKNRPGYAANDVN-NLFCLRCHDKMG 749
DH AR+V +RP AA+D CLR D G
Sbjct: 79 DHLARDVFHRPFTAADDAELARLCLRLDDDAG 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,764,501
Number of Sequences: 37544
Number of extensions: 485795
Number of successful extensions: 1355
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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