Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a22f
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.44
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 24 1.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 4.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.2
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 9.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 9.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 9.5
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.8 bits (54), Expect = 0.44
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -1
Query: 271 WAQTKQFVCHN-----SPLEFTIFSFGSNPSPQRVQYILSR 164
+A +FVC N P+ ++ G NP QR+ +LSR
Sbjct: 344 YASLLEFVCVNYVGRKRPMHNVVYRPGENPVTQRLPAVLSR 384
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 24.2 bits (50), Expect = 1.4
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -1
Query: 547 FCSPSALIRALHTWHNARP 491
+CS ++L+ ++T+H +RP
Sbjct: 45 YCSRNSLMTHIYTYHKSRP 63
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +3
Query: 618 GYHFTCATCGVELDHTAREVKNRPGYAANDVNNLFCLRCH 737
G +TC CG L +++ +N+ C CH
Sbjct: 369 GVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCH 408
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 396 EELHTILKELRFITDRMKK 414
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 464 EELHTILKELRFITDRMKK 482
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 341 EILFTILSSLKFIEDTIRK 285
E L TIL L+FI D ++K
Sbjct: 464 EELHTILKELRFITDRMKK 482
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 660 HTAREVKNRPGYAANDVNNLFCLRCH 737
HT EVK P + A + +RCH
Sbjct: 399 HTIPEVKVTPRFQAKRLKEEANIRCH 424
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/24 (33%), Positives = 9/24 (37%)
Frame = +3
Query: 501 LCHVCNARIKADGLQNYMCHKCHG 572
LC +C R Y C C G
Sbjct: 109 LCSICGDRASGKHYGVYSCEGCKG 132
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/24 (33%), Positives = 9/24 (37%)
Frame = +3
Query: 501 LCHVCNARIKADGLQNYMCHKCHG 572
LC +C R Y C C G
Sbjct: 109 LCSICGDRASGKHYGVYSCEGCKG 132
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 362 LCKVWRVCD 388
LCK+W CD
Sbjct: 108 LCKLWLTCD 116
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 362 LCKVWRVCD 388
LCK+W CD
Sbjct: 108 LCKLWLTCD 116
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 362 LCKVWRVCD 388
LCK+W CD
Sbjct: 108 LCKLWLTCD 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,236
Number of Sequences: 438
Number of extensions: 5049
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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