Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a19f
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 59 4e-09
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 53 3e-07
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 36 0.024
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.042
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 35 0.056
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 33 0.30
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 33 0.30
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 29 3.7
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 29 3.7
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 4.8
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 8.5
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 8.5
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 58.8 bits (136), Expect = 4e-09
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 10/262 (3%)
Frame = +1
Query: 16 MRSLVFFILCFVTYTSSESSANE--EFVGW-LEKVGIKTAA--KIKQAEQHQIFMQRIVG 180
M+ +F +L V S + N+ E VG L ++ A ++ + R++G
Sbjct: 1 MKVWIFLLLVGVINKVSTDNKNDVIEKVGCGLHSTNVELAQTRSAQEPADYVTLDHRLIG 60
Query: 181 GAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 360
G+ + + P+ LL + + CGGS++ P +LTAAHC+ R R ++V +G
Sbjct: 61 GSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDR-RPTSYSVRVG 115
Query: 361 TPFLFHGGLRIQASSIAVHHQYDFR-TFANDIAMLYLPRRIIFNHAVQPIPLATDSLLST 537
G + +++++H Y+ + D A++ + + N + P+ SL +
Sbjct: 116 -GHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPV--NTSTTARPICLPSLPAV 172
Query: 538 DKAGMWAVAAGYG---RYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS- 705
+ V G+G S + PT + L T+ + Y G + L S +C
Sbjct: 173 E--NRLCVVTGWGSTIEGSSLSAPTLREI-HVPLLSTLFCSSLPNYIGRIHLPSMLCAGY 229
Query: 706 GVGGVGICRGDSGGPLTINHQG 771
G + C+GDSGGPL G
Sbjct: 230 SYGKIDSCQGDSGGPLMCARDG 251
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 52.8 bits (121), Expect = 3e-07
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 7/207 (3%)
Frame = +1
Query: 169 RIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFT 348
R+VGG P+ A L N+ CG SIL ++TAAHC F+ R +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHC-FEEDERVSSYE 81
Query: 349 VVLGTPFLFHGGLRIQASSIAVHHQYDF--RTFANDIAMLYLP-RRIIFNHAVQPIPLAT 519
VV+G Q + H Y F++DIA+L +P I FN QPI L +
Sbjct: 82 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 520 DSLLSTDKAGMWAVAAGYG----RYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLD 687
+ T G V +G+G RY++ + A + Y ++
Sbjct: 142 KDFVYT--PGRQCVVSGWGSMGLRYAERLQ-----AALIPIINRFDCVNSSQIYSSMSRS 194
Query: 688 SNICTSGVGGVGICRGDSGGPLTINHQ 768
+ GG+ C+GDSGGP +
Sbjct: 195 AFCAGYLEGGIDSCQGDSGGPFACRRE 221
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +1
Query: 262 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFL---FHGGLRIQASSIAVHHQY-- 426
CGG ++ P+ ++T+AHC F G + AV V LG L G ++ ++A+ ++
Sbjct: 46 CGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKKFFN 105
Query: 427 DFRTFANDIAMLYLPRRIIFNHAVQPIPLATDSLLST 537
D +D+A+++LP+R H+ P+ L L ST
Sbjct: 106 DASEANDDVAVIFLPQRADVCHS--PLSLQIAKLPST 140
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 205 HPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVV 354
H YL +L +L++ + C G++L+P+ +LT++ C+ D R + ++
Sbjct: 28 HQYLVKVLTKDTKLKNISTCTGTLLSPSVVLTSSKCFPDTRKNLIAQAII 77
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 613 MARNVFLQTISLETCRGYYGNVVLDSNICTSGVGGVGICRGDSGGPLTINHQ 768
M + + L T +L TC +G + + CT+ +C GDSGG LT HQ
Sbjct: 232 MIQVLTLATETLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLTF-HQ 282
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +1
Query: 136 KQAEQHQIFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCW 315
+Q+ + G P + P+ + + + CGG+++T +LTAAHC+
Sbjct: 20 RQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCF 79
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 384 ATMEQEWGSQYDSETYCTISSIEPAMSCS*DAGRG 280
AT E+ WG+ +++CT E CS D+G G
Sbjct: 244 ATCEENWGTSIPFDSFCTAEE-EDKNVCSGDSGGG 277
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 160 FMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNR 333
F ++ G A + P+ + + QS C G+I++P IL A HC F G+NR
Sbjct: 159 FSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC-FAGQNR 215
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 32.7 bits (71), Expect = 0.30
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Frame = +1
Query: 157 IFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRA 336
IF RI+GG I+ L+ + CG +++ ++TAAHC + R+
Sbjct: 33 IFSFRIIGGN--SIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRS 90
Query: 337 VRFTVVLGTPFLFHGGLRIQASSIAVHHQYDFRTFANDIAMLYLPRRIIFNHAVQPIPLA 516
F V ++ + I H Y+ +T NDIA+L + + ++P+ L
Sbjct: 91 --FVYVREPKNNRERSFSVKEAYI--HSGYNNQTADNDIALLRISSD-LSKLGIKPVCLV 145
Query: 517 TD--SLLSTDKAGMWAVAAGYGRYSDVINPTTNTMARNVFLQT-----ISLETCRGYYGN 675
D LL K G V GYG + + + LQ+ IS + C +
Sbjct: 146 HDDSKLLKQYKNG---VVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRF 202
Query: 676 VVLDS------NICTSGVGGVGICRGDSGGPLTIN 762
+ L S IC +G G GDSGGPL I+
Sbjct: 203 LSLLSVKITGYQIC-AGAYLHGTAPGDSGGPLLIH 236
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 211 YLAGLLIDINE-LQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGL 387
++AGL+ + L C SI C F V F + P L GG
Sbjct: 405 WMAGLVASVTSFLVFVFVCITLTWVAVSIAYVGACIFGDEGLVVTFMPMFVLPMLVFGGF 464
Query: 388 RIQASSIAVHHQY 426
+ A+SI V++QY
Sbjct: 465 YVNANSIPVYYQY 477
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 496 VQPIPLATDSLL-STDKAGMWAVAAG 570
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 496 VQPIPLATDSLL-STDKAGMWAVAAG 570
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 496 VQPIPLATDSLL-STDKAGMWAVAAG 570
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 496 VQPIPLATDSLL-STDKAGMWAVAAG 570
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 249 ITGRVRRIDPYPCQHLNC-SSLLVRWKKSCSTFHCRTGNPIPVP 377
+ G + + DP+ + C S +W S + C NP P P
Sbjct: 1018 VQGEIAQCDPFNPPNAPCPSEFTCQWSLSNQRYQCCGSNPAPTP 1061
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 333 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 446
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 333 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 446
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,230,970
Number of Sequences: 27780
Number of extensions: 446296
Number of successful extensions: 1478
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -