Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17a14f
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0407 - 21040536-21041352,21041452-21042044                       29   3.4  
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873...    28   7.8  

>05_04_0407 - 21040536-21041352,21041452-21042044
          Length = 469

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 220 EDDDEKVTKDNAQKWANFMTKLFVLEKLCLIFSCCLVYVSTFLS 89
           E+D++ V K    + A  + +LF +   CLI++  L   STF +
Sbjct: 202 EEDEQVVGKAGLVEQAKGIVRLFPIWATCLIYAVALAQSSTFFT 245


>03_06_0292 -
           32886148-32886354,32886997-32887154,32887265-32887378,
           32887660-32887924
          Length = 247

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 131 YFFMLFSLCINISFTLALFYKNINYLFDNIPKLSAIV 21
           +F +LF++CI+ S  L    KN   +F      +AIV
Sbjct: 105 FFLLLFTVCISFSVGLGCLSKNGTVIFQAAGMTAAIV 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,406,605
Number of Sequences: 37544
Number of extensions: 281576
Number of successful extensions: 525
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)