Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV17a07r
         (940 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23646-2|AAK67235.1|  304|Caenorhabditis elegans Hypothetical pr...    75   6e-14
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    31   1.6  
U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion transpo...    29   3.6  
Z83221-3|CAB05705.1|  498|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>L23646-2|AAK67235.1|  304|Caenorhabditis elegans Hypothetical
           protein F44E2.10 protein.
          Length = 304

 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = -3

Query: 890 KVFDVVLNGDHTIVADLDIFDKVG-RGVAHDEYIPYTIKNGKLYYNEEESDIRGGKIKVE 714
           K+F++ +N  H  V +LDIFD  G RG AHD YIP  IK   +  +    + +G K+ +E
Sbjct: 131 KIFNIRINS-HLAVKNLDIFDAAGGRGFAHDVYIPVVIKGSSISVSGHSREYKG-KVIIE 188

Query: 713 FIKGYRDNPKINALYVMTGTIDEVPKLPPLVWPENETEEARDEIEEKNTK 564
             KG  DNPK+N   ++ GT++++P  P     E+   E  D  E+  T+
Sbjct: 189 LSKGPHDNPKLNGYAILRGTVEDLPSPPEKFIVEDHFPEDFDIYEDDATE 238


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -3

Query: 698 RDNPKINALYVM--TGTID-EVPKLPPLV--WPENETEEARDEIEEKNTKARRASGPKQP 534
           +D  K N ++ +  T  ++ E+ + PP+    PE E +E   E+ +K  K RRA   + P
Sbjct: 378 KDRKKGNGIFDVEETEAVEAEIQEAPPVENEQPEEEEKECTPEVVKKEKKKRRADKNQNP 437

Query: 533 DPYVMDES 510
              V +E+
Sbjct: 438 SATVEEEA 445


>U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical
           protein C43H6.7 protein.
          Length = 306

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 750 FFIIVEFPVLYGVRYIFIMSNTSS-YFIKNIQIGYYSMVSI 869
           FFII+ +  LY   ++ ++  T   YF+ NIQ  YY   +I
Sbjct: 51  FFIIIPYEQLYKPAWLLLLLGTCGLYFLFNIQYHYYKARTI 91


>AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion
           transporter ABTS-4b protein.
          Length = 936

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 283 FLEFKKYITISIYDLRFKLALISKLVLYNHGLNVFF 176
           FLE    + I I  L F L ++S  +   HGL+V F
Sbjct: 864 FLEIVSSLKICIGGLLFPLFIVSNAIFVKHGLSVIF 899


>Z83221-3|CAB05705.1|  498|Caenorhabditis elegans Hypothetical
           protein C49A1.5 protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 89  NYSLIIGLKFIISFINVNSTYYHTTSQVLKKN 184
           N S I   KF +S   +NS YY+ TS+ L KN
Sbjct: 33  NESRISPEKFPVSHAFINSVYYYPTSKSLGKN 64


>Z75552-6|CAA99939.1|  332|Caenorhabditis elegans Hypothetical
           protein W04D2.2a protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 678 IYLWVIPISFDKFNFNFSSPNIRFFFIIVEFPVLY 782
           +YL ++ I F+K NF  S   I +   I++F + Y
Sbjct: 46  LYLPILSIIFEKDNFKMSCFKIMYLLGIIDFMITY 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,521,314
Number of Sequences: 27780
Number of extensions: 397303
Number of successful extensions: 1056
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)