Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a03r
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 46 3e-05
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 42 6e-04
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 41 0.001
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 35 0.067
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 33 0.21
AC199169-4|ABO33250.1| 275|Caenorhabditis elegans Hypothetical ... 32 0.47
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 30 1.9
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 30 1.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 7.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 46.4 bits (105), Expect = 3e-05
Identities = 57/219 (26%), Positives = 85/219 (38%), Gaps = 16/219 (7%)
Frame = -2
Query: 874 WVITAAHC---VAGRITVVIRAGVTNLTTPEYISESTEWYNYPTYDDTRPNLVQPNDISL 704
W++TAAHC + R V +R N + E+ Y + Y+ N NDI+L
Sbjct: 75 WLVTAAHCALQLQTRSFVYVREPKNNRERSFSVKEA---YIHSGYN----NQTADNDIAL 127
Query: 703 LRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYLRAVA 524
LR+ + V + + Y V G + P+++N L++ +
Sbjct: 128 LRISSDLSKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTS 187
Query: 523 NPT-----CALNFGTL------ITPNAICARFFNVTSQSTCQGDSGGPLVHVDPQGVPIL 377
P C + L IT ICA + T GDSGGPL+ G +
Sbjct: 188 VPIISDDDCVKTWRFLSLLSVKITGYQICAGAY---LHGTAPGDSGGPLLIHKSNGEYVQ 244
Query: 376 IGVTSFVAGGEFGC--HSGFPAGFIRPGPFHDWFYRVSG 266
IG+TS+ A G G FP + R + W V G
Sbjct: 245 IGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVIG 283
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 41.9 bits (94), Expect = 6e-04
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 9/205 (4%)
Frame = -2
Query: 871 VITAAHCVAG--RIT---VVIRAGVTNLTTP-EYISESTEWYNYPTYDDTRPNLVQPNDI 710
+ITAAHC R++ VV+ N T E I + YP Y D + +DI
Sbjct: 64 LITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKD-----IFSHDI 118
Query: 709 SLLRLHRP-VVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYLR 533
++L + P + F Y QPI + S + G SG G + A E L +
Sbjct: 119 AILEIPYPGIEFNEYAQPICLPSKDFVYT--PGRQCVVSGWGSMGLRYA--ERLQAALIP 174
Query: 532 AVANPTC--ALNFGTLITPNAICARFFNVTSQSTCQGDSGGPLVHVDPQGVPILIGVTSF 359
+ C + + ++ +A CA + S CQGDSGGP G +L GV S+
Sbjct: 175 IINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDS-CQGDSGGPFACRREDGAFVLAGVISW 233
Query: 358 VAGGEFGCHSGFPAGFIRPGPFHDW 284
G+ P + P+ W
Sbjct: 234 ---GDGCAQKKQPGIYTMVAPYLSW 255
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -2
Query: 475 ICARFFNVTSQS---TCQGDSGGPLVHVDPQ-GVPILIGVTSFVAGGEFGCHSGFPAGFI 308
ICA NV++ S TC GDSGG L + D G LI +TSF G GC S A F
Sbjct: 219 ICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSF---GTRGCPSNMLARFT 275
Query: 307 RPGPFHDWFYRVSGV 263
R + + +GV
Sbjct: 276 RVDMYLNLICNYTGV 290
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 35.1 bits (77), Expect = 0.067
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = -2
Query: 715 DISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYL 536
D +++R+H PV + +PI + S A N L V + + + L +++
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPS-LPAVENR--LCVVTGWGSTIEGSSLSAPTLREIHV 201
Query: 535 RAVANPTCAL--NF-GTLITPNAICARFFNVTSQSTCQGDSGGPLV 407
++ C+ N+ G + P+ +CA + + +CQGDSGGPL+
Sbjct: 202 PLLSTLFCSSLPNYIGRIHLPSMLCAGY-SYGKIDSCQGDSGGPLM 246
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 604 YASGHGRLWTNGATPEVLNWVYLRAVANPTCALNFGTLITPNAICARFFNVTSQSTCQGD 425
+ S G+ + N A P ++ + L TC N+GT I ++ C ++ C GD
Sbjct: 217 WGSDPGKGFDNAAFP-MIQVLTLATETLATCEENWGTSIPFDSFCTA--EEEDKNVCSGD 273
Query: 424 SGGPLV-HVDPQGVPILIGVTSF 359
SGG L H +I + S+
Sbjct: 274 SGGGLTFHQSDSAREFIIAIVSY 296
>AC199169-4|ABO33250.1| 275|Caenorhabditis elegans Hypothetical
protein F38A1.10 protein.
Length = 275
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/100 (23%), Positives = 40/100 (40%)
Frame = -2
Query: 682 VFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYLRAVANPTCALN 503
V + YL + Q +++ +Y T + S +G W + + +WV+ NP N
Sbjct: 54 VISSYLAYVPDQYTSNFLASY-ARTAFRSANGIFWIGLSRNNISSWVWDNG--NPVTYTN 110
Query: 502 FGTLITPNAICARFFNVTSQSTCQGDSGGPLVHVDPQGVP 383
FGT + N + N + + D + DP P
Sbjct: 111 FGTQLGQNYVAESSANSKWSTFGENDKNFFVCSYDPAAPP 150
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 397 PQGVPILIGVTSFVAGGEFGCHSGFPAGFIRPGPFHDWFYRVSGVDFENL 248
P G P L+ SF+ G+FG SGF +I G + R G+ ++
Sbjct: 437 PDGYPWLVASASFI--GKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSM 484
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 397 PQGVPILIGVTSFVAGGEFGCHSGFPAGFIRPGPFHDWFYRVSGVDFENL 248
P G P L+ SF+ G+FG SGF +I G + R G+ ++
Sbjct: 420 PDGYPWLVASASFI--GKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSM 467
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 397 PQGVPILIGVTSFVAGGEFGCHSGFPAGFIRPGPFHDWFYRVSGVDFENL 248
P G P L+ SF+ G+FG SGF +I G + R G+ ++
Sbjct: 420 PDGYPWLVASASFI--GKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSM 467
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical protein
C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 457 NVTSQSTCQGDSGGPLVHVDPQGVPILIGVTSFVAGGEFGCHSGF 323
N SQ+TC ++ + P G+P++ G T G + GC GF
Sbjct: 919 NFISQNTCM-EACPEYRNYCPHGIPLIEGSTVTSCGIDKGCPEGF 962
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 455 IEESGAD--RIRRNQGAEVEGASRVGDSTQVYPVQDLGSSTIRPETTMTAGIHGES 616
+E SG+D + + E+EG S GD +D+ ST +P + G +GE+
Sbjct: 1178 LEISGSDLTKATKKPHVEIEG-SGTGDEEITATTRDVSKSTKKPRVEVDGGDNGET 1232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,558,836
Number of Sequences: 27780
Number of extensions: 393881
Number of successful extensions: 1048
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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